miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42655_tae-MIR1122:mirbase
          Length = 295

 Score =  125 bits (63), Expect = 9e-30
 Identities = 113/129 (87%), Gaps = 3/129 (2%)
 Strand = Plus / Plus

                                                                       
Query: 9   aatactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagt 68
           ||||||||||||||||||||| | ||| |||| ||||||||||||||| ||||||| |||
Sbjct: 23  aatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagt 82

                                                                       
Query: 69  tacattttagtgttagatacattcgtat---gacaaatctaagacaagaattttgggaca 125
            |  ||||||| |||||||||| |||||   ||| |||||||||||||||||||||||| 
Sbjct: 83  catgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacg 142

                    
Query: 126 gagggagta 134
           |||||||||
Sbjct: 143 gagggagta 151



 Score = 89.7 bits (45), Expect = 5e-19
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                    
Query: 10  atactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 66
           ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 152 atactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatcta 96




>41809_bdi-MIR1122:mirbase
          Length = 180

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 35 gtcttaaatttgtctaaatacggatgtatcta 66
          |||| ||||||||| |||||||||||||||||
Sbjct: 95 gtctcaaatttgtccaaatacggatgtatcta 64




>41811_bdi-MIR1135:mirbase
          Length = 138

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 32 cttgtcttaaatttgtctaaatacggatgtatcta 66
          ||||||| ||||||| | |||||||||||||||||
Sbjct: 36 cttgtctcaaatttgcccaaatacggatgtatcta 70




>42275_osa-MIR1862e:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 10 atactccctccgtcccaaaat 30
          |||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaat 72




>42274_osa-MIR1862d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 115 attttgggacagagggagtac 135
           |||||||||||||||||||||
Sbjct: 48  attttgggacagagggagtac 28



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 10  atactccctccgtcccaaaat 30
           |||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaat 103




>42271_osa-MIR1862a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 10 atactccctccgtcccaaaat 30
          |||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaat 68




>41879_far-MIR1122:mirbase
          Length = 300

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 11  tactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 66
           |||||||||||| | |||||   ||||| || ||| |||| |||||||||||||||
Sbjct: 219 tactccctccgtacaaaaataagtgtctcaactttttctagatacggatgtatcta 164