miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 77/88 (87%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 10  aatactccctccatcccaaaatataagaatgtttttcacactagcataatgtcaaaaacg 69
           |||||||||||| || || ||||||||||||||||| ||||||    | ||||||||| |
Sbjct: 101 aatactccctccgtctcataatataagaatgtttttgacactac---actgtcaaaaatg 45

                                       
Query: 70  ttcttatattttgggacggagggagtac 97
           |||||||||| |||||||||||||||||
Sbjct: 44  ttcttatattatgggacggagggagtac 17



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 71/85 (83%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 12 tactccctccatcccaaaatataagaatgtttttcacactagcataatgtcaaaaacgtt 71
          |||||||||| ||||| ||||||||||  ||||| ||| |    || |||||||||| ||
Sbjct: 18 tactccctccgtcccataatataagaacatttttgacagtg---tagtgtcaaaaacatt 74

                                   
Query: 72 cttatattttgggacggagggagta 96
          |||||||| || |||||||||||||
Sbjct: 75 cttatattatgagacggagggagta 99




>41895_hvu-MIR1120:mirbase
          Length = 84

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                               
Query: 17 cctccatcccaaaatataagaatgtttttcacactag 53
          ||||| ||||| |||||||||||||||||||||||||
Sbjct: 80 cctccgtcccataatataagaatgtttttcacactag 44



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 67/80 (83%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 12 tactccctccatcccaaaatataagaatgtttttcacactagcataatgtcaaaaacgtt 71
          |||||||||| ||||| | ||||||| ||||||| | ||||   || ||| |||||| ||
Sbjct: 2  tactccctccttcccata-tataagagtgtttttaatactacactagtgtgaaaaacatt 60

                              
Query: 72 cttatattttgggacggagg 91
          |||||||| |||||||||||
Sbjct: 61 cttatattatgggacggagg 80




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 72  cttatattttgggacggagggagtac 97
           |||||||| |||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagtac 128