miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcccacaatgaaagacgttttttgacactagtgtagtgtcaaaaaacgt 70
           |||||||||||||||| |||  ||||   |||||||||   |||||||||||||||   |
Sbjct: 18  tactccctccgtcccataatataagaacatttttgaca---gtgtagtgtcaaaaacatt 74

                                     
Query: 71  cttacattatgggacggagggagtat 96
           |||| |||||| ||||||||||||||
Sbjct: 75  cttatattatgagacggagggagtat 100



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 70 tcttacattatgggacggagggagta 95
          ||||| ||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggagta 18




>42663_tae-MIR1130:mirbase
          Length = 122

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 63  aaaaacgtcttacattatgggacggag 89
           |||||||||||||||||||||||||||
Sbjct: 79  aaaaacgtcttacattatgggacggag 105



 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 63 aaaaacgtcttacattatgggacggagggagtat 96
          ||||||||||||||||| | ||||||||||||||
Sbjct: 43 aaaaacgtcttacattacgagacggagggagtat 10




>41897_hvu-MIR1436:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 73 tacattatgggacggagggagta 95
          |||||||||||||||||||||||
Sbjct: 64 tacattatgggacggagggagta 86




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  acattatgggacggagggagta 95
           ||||||||||||||||||||||
Sbjct: 121 acattatgggacggagggagta 142



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 76 attatgggacggagggagta 95
          ||||||||||||||||||||
Sbjct: 31 attatgggacggagggagta 12




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  cttacattatgggacggagggagta 95
           |||| ||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127