miRNEST 2.0, an integrative microRNA resource :: BLAST
>42634_tae-MIR159a:mirbase
Length = 177
Score = 351 bits (177), Expect = 1e-97
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 8 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
Query: 68 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 120
Query: 128 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 297 bits (150), Expect = 2e-81
Identities = 172/178 (96%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 7 ggtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgtt 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ggtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgtt 60
Query: 67 catggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatg 125
||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||
Sbjct: 61 catggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatg 120
Query: 126 accgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 178
>41868_far-MIR159:mirbase
Length = 200
Score = 163 bits (82), Expect = 6e-41
Identities = 162/186 (87%), Gaps = 2/186 (1%)
Strand = Plus / Plus
Query: 5 gaggtggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgctc 63
|||||||||||||||||||||||||||| ||||| | | |||| | || |||||||||
Sbjct: 11 gaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctc 70
Query: 64 gttcatggttcccactatcctatctcc-atagaaaacgaggagagaggcctgtggtttgc 122
|||||||||||||||||||||| |||| | |||| | ||||| |||||||||| | ||
Sbjct: 71 gttcatggttcccactatcctacctccgtttgaaaccagggagataggcctgtggctagc 130
Query: 123 atgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgc 182
|||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 131 atgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctgc 190
Query: 183 atcttg 188
||||||
Sbjct: 191 atcttg 196
>41918_osa-MIR159b:mirbase
Length = 188
Score = 109 bits (55), Expect = 8e-25
Identities = 152/181 (83%), Gaps = 5/181 (2%)
Strand = Plus / Plus
Query: 8 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 67
||||||||||| || |||||||||| ||| || | ||||||| | |||||||| ||||
Sbjct: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
Query: 68 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 127
|||||||||||||| ||||||| |||| ||| ||| | |||| |||||||||||||||
Sbjct: 69 atggttcccactattctatctc-ataggaaaagag---ataggcttgtggtttgcatgac 124
Query: 128 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcatctt 187
| |||||||| || | ||| ||||||| || |||||||||||||||||||||||||||
Sbjct: 125 caaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcatctt 184
Query: 188 g 188
|
Sbjct: 185 g 185
>42690_zma-MIR159a:mirbase
Length = 246
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||||| | |||||| | || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 163 tggattgaagggagctctgcatc 185
|||||||||||||||||||||||
Sbjct: 209 tggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 19 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 77
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 78 ggttcccactatcctatctc 97
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 165 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 224
Query: 163 tggattgaagggagctctgcatc 185
|||||||||||||||||||||||
Sbjct: 225 tggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 73.8 bits (37), Expect = 4e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 172
|||||||||||||||||| |||| || || |||| |||| ||||| ||||||||||||
Sbjct: 178 tgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaag 237
Query: 173 ggagctctgcatc 185
|||||||||||||
Sbjct: 238 ggagctctgcatc 250
>42452_sof-MIR159a:mirbase
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 163 tggattgaagggagctctgcatc 185
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
>42700_zma-MIR159k:mirbase
Length = 200
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || ||| |||| || ||||||||||||||||||||
Sbjct: 130 tgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgctgtttggattgaa 189
Query: 172 gggagctctgc 182
|||||||||||
Sbjct: 190 gggagctctgc 200
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 58 ctgctcgttcatggttcccactatcctatctc 89
|||||||||||||||||||||| ||| |||||
Sbjct: 48 ctgctcgttcatggttcccactgtcccatctc 79
>42699_zma-MIR159j:mirbase
Length = 252
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || ||| |||| || ||||||||||||||||||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggattgaa 241
Query: 172 gggagctctgc 182
|||||||||||
Sbjct: 242 gggagctctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactatcctatctc 89
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42453_sof-MIR159b:mirbase
Length = 266
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 163 tggattgaagggagctctgcatc 185
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 79.8 bits (40), Expect = 7e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>42691_zma-MIR159b:mirbase
Length = 221
Score = 81.8 bits (41), Expect = 2e-16
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || || |||| || ||||||||||||||||||||
Sbjct: 134 tgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgtttggattgaa 192
Query: 172 gggagctctgcatcttg 188
|||||||||||||||||
Sbjct: 193 gggagctctgcatcttg 209
>42494_sbi-MIR159:mirbase
Length = 226
Score = 81.8 bits (41), Expect = 2e-16
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
Query: 163 tggattgaagggagctctgca 183
|||||||||||||||||||||
Sbjct: 206 tggattgaagggagctctgca 226
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 57 gctgctcgttcatggttcccactatcctatctc 89
|||||||||||||||||||||||||||||||||
Sbjct: 50 gctgctcgttcatggttcccactatcctatctc 82
>42695_zma-MIR159f:mirbase
Length = 215
Score = 79.8 bits (40), Expect = 7e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
||||||||| |||||||||||||||||| | ||||||| || | |||||||||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaagggtg-gttccgctgctcgttcat 59
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 60 ggttcccactatcctatctc 79
Score = 79.8 bits (40), Expect = 7e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| ||||||||||||||||||||||| || ||| ||| |||| ||||| ||
Sbjct: 136 gagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgctctt 195
Query: 163 tggattgaagggagctctgc 182
||||||||||||||||||||
Sbjct: 196 tggattgaagggagctctgc 215
>42456_sof-MIR159e:mirbase
Length = 264
Score = 79.8 bits (40), Expect = 7e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 69
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 70 ggttcccactatcctatctc 89
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 60.0 bits (30), Expect = 6e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 103 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 162
|||| |||| |||||||||||||||||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 163 tggattgaagggagctct 180
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>42698_zma-MIR159i:mirbase
Length = 252
Score = 77.8 bits (39), Expect = 3e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 241
Query: 172 gggagctctgc 182
|||||||||||
Sbjct: 242 gggagctctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactatcctatctc 89
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42697_zma-MIR159h:mirbase
Length = 200
Score = 77.8 bits (39), Expect = 3e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 130 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 189
Query: 172 gggagctctgc 182
|||||||||||
Sbjct: 190 gggagctctgc 200
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactatcctatctc 89
||||||||||||||||||||||||| ||| |||||
Sbjct: 45 cagctgctcgttcatggttcccactgtcccatctc 79
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 151 ctgaccgctgtttggattgaagggagctctgcatcttg 188
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaccgctgtttggattgaagggagctctgcatcttg 38
>42696_zma-MIR159g:mirbase
Length = 252
Score = 69.9 bits (35), Expect = 7e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 113 tgtggtttgcatgaccgaggagccgcttcgatccc-tcgctgaccgctgtttggattgaa 171
||||||||||||||||||||||| || ||| ||| ||| ||||||||||||||| ||||
Sbjct: 182 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 241
Query: 172 gggagctctgc 182
||||| |||||
Sbjct: 242 gggagttctgc 252
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 55 cagctgctcgttcatggttcccactatcctatctc 89
||||||||||||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>41917_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatctt 187
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatctt 187
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>42635_tae-MIR159b:mirbase
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatct 186
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatcttg 188
|||||||||||||||||||| |||||||
Sbjct: 152 tttggattgaagggagctctacatcttg 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctctgcatct 186
|||||||||||||||||||||| |||||
Sbjct: 153 tgtttggattgaagggagctctacatct 180
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatctt 187
|||||||||||||||||||| ||||||
Sbjct: 183 tttggattgaagggagctctacatctt 209
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatct 186
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctgcatct 186
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194
