miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42653_tae-MIR1120:mirbase
          Length = 119

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 87  aaaaatgctcttatattatgggacggagggagta 120
           ||||||| ||||||||||||||||||||||||||
Sbjct: 51  aaaaatgttcttatattatgggacggagggagta 18



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 32 tactccctccatcccataatataaga 57
          |||||||||| |||||||||||||||
Sbjct: 18 tactccctccgtcccataatataaga 43



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 95  tcttatattatgggacggagggagta 120
           |||||||||||| |||||||||||||
Sbjct: 74  tcttatattatgagacggagggagta 99




>42219_osa-MIR1436:mirbase
          Length = 161

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 99  atattatgggacggagggagtagca 123
           |||||||||||||||||||||||||
Sbjct: 33  atattatgggacggagggagtagca 9



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attatgggacggagggagtag 121
           |||||||||||||||||||||
Sbjct: 123 attatgggacggagggagtag 143




>42167_osa-MIR818d:mirbase
          Length = 139

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 96  cttatattatgggacggagggagta 120
           |||||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 32 tactccctccatcccataatataag 56
          ||||| |||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataag 39



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 32  tactccctccatcccataatataag 56
           |||||||||| ||||||||||||||
Sbjct: 127 tactccctccgtcccataatataag 103




>42225_osa-MIR1442:mirbase
          Length = 185

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 96  cttatattatgggacggagggagtagcatact 127
           |||||||||||||||||| ||||||| |||||
Sbjct: 141 cttatattatgggacggatggagtagtatact 110




>42165_osa-MIR818b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 94  ctcttatattatgggacggagg 115
           ||||||||||||||||||||||
Sbjct: 22  ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  cttatattatgggacggagg 115
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113