miRNEST 2.0, an integrative microRNA resource :: BLAST
>41895_hvu-MIR1120:mirbase
Length = 84
Score = 81.8 bits (41), Expect = 7e-17
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 8 cctccgttccataatataagagtgtttttgacactagtgt-gtgtaaaaaacactcttat 66
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Sbjct: 80 cctccgtcccataatataagaatgtttttcacactagtgtagtattaaaaacactcttat 21
Query: 67 attatgggacggagggagtag 87
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Sbjct: 20 a-tatgggaaggagggagtag 1
Score = 56.0 bits (28), Expect = 4e-09
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgttccataatataagagtgtttttgacactagtgt-gtgtaaaaaacact 61
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Sbjct: 2 tactccctccttcccata-tataagagtgtttttaatactacactagtgtgaaaaacatt 60
Query: 62 cttatattatgggacggagg 81
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Sbjct: 61 cttatattatgggacggagg 80
>42653_tae-MIR1120:mirbase
Length = 119
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/85 (87%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgttccataatataagagtgtttttgacactagtgt-gtgtaaaaaacact 61
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Sbjct: 18 tactccctccgtcccataatataagaacatttttgaca---gtgtagtgtcaaaaacatt 74
Query: 62 cttatattatgggacggagggagta 86
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Sbjct: 75 cttatattatgagacggagggagta 99
Score = 65.9 bits (33), Expect = 4e-12
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgttccataatataagagtgtttttgacactagtgtgtgtaaaaaacactc 62
|||||||||||| |||||||||||| |||||||||||||| ||| ||||| ||
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacacta--cactgtcaaaaatgttc 42
Query: 63 ttatattatgggacggagggagta 86
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Sbjct: 41 ttatattatgggacggagggagta 18
>42167_osa-MIR818d:mirbase
Length = 139
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 cttatattatgggacggagggagta 86
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Sbjct: 103 cttatattatgggacggagggagta 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 3 tactccctccgttccataatataag 27
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Sbjct: 127 tactccctccgtcccataatataag 103
>42219_osa-MIR1436:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 65 atattatgggacggagggagtag 87
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Sbjct: 33 atattatgggacggagggagtag 11
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 attatgggacggagggagtag 87
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Sbjct: 123 attatgggacggagggagtag 143
>42225_osa-MIR1442:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 62 cttatattatgggacggagggagtag 87
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Sbjct: 141 cttatattatgggacggatggagtag 116
>42165_osa-MIR818b:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 60 ctcttatattatgggacggagg 81
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Sbjct: 22 ctcttatattatgggacggagg 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 cttatattatgggacggagg 81
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Sbjct: 94 cttatattatgggacggagg 113
