miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41879_far-MIR1122:mirbase
Length = 300
Score = 161 bits (81), Expect = 2e-40
Identities = 105/113 (92%)
Strand = Plus / Plus
Query: 21 aaaataagtgttttagttttgtctagacgcagatgtatctagatctattttagttgtaga 80
||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 108 aaaataagtgtcttagttttgtctagattcagatgtatctaaacatattttagttgtaga 167
Query: 81 tacatccgtatctagaaaaagttgagacacttattttagaacggagggagtag 133
||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 168 tacatccgtatctagaaaaagttgagacacttatttttgtacggagggagtag 220
>42661_tae-MIR1128:mirbase
Length = 190
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 116 gatgtatctagatgtattttagttctagatacatcc 81
>42668_tae-MIR1135:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 51 agatgtatctagatctattttagttgtagatacatccgtatc 92
||||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 73 agatgtatctagacgtattttagttctagatacatccatatc 32
>42669_tae-MIR1136:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| || ||||||||
Sbjct: 37 gatgtatctagatgtattttagttctaaatacatcc 72
>42660_tae-MIR1127:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 53 atgtatctagatctattttagttgtagatacatcc 87
||||||||| || |||||||||||||||||||||
Sbjct: 56 atgtatctaaatgcattttagttgtagatacatcc 90
