miRNEST 2.0, an integrative microRNA resource :: BLAST
>31478_oan-mir-122:mirbase
Length = 111
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 3 ccagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcaca 62
|||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 20 ccagagctgtggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcaca 79
Query: 63 ctaaatagctac 74
||||||||||||
Sbjct: 80 ctaaatagctac 91
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 1 cagagctgtggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 61 taaatagctac 71
>27371_mdo-mir-122:mirbase
Length = 74
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacac 60
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 61 taaatagctac 71
>33197_bta-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacac 66
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 67 taaatagctac 77
>33967_ssc-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacac 66
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 67 taaatagctac 77
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 61 taaatagctac 71
>27714_mml-mir-122a:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 67 taaatagctac 77
>28426_hsa-mir-122:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 67 taaatagctac 77
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 13 taaatagctac 3
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 13 taaatagctac 3
>30814_ppy-mir-122:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 67 taaatagctac 77
>27006_eca-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 7 agctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacactaa 66
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
Query: 67 atagct 72
||||||
Sbjct: 61 atagct 66
>34584_fru-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 7 agctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacactaa 66
|||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 agctatggagtgtgacaatggtgtttgtttcctttctttcaaacgccattatcacactaa 60
Query: 67 atagct 72
||||||
Sbjct: 61 atagct 66
>34731_tni-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 7 agctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacactaa 66
|||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtcctttctttcaaacgccattatcacactaa 60
Query: 67 atagct 72
||||||
Sbjct: 61 atagct 66
>26449_tgu-mir-122:mirbase
Length = 72
Score = 95.6 bits (48), Expect = 4e-21
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 3 ccagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcaca 62
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 2 ccagagctgtggagtgtgacaatggtgtttgtgtcc-atctatcaaacgccattatcaca 60
Query: 63 ctaaatag 70
||||||||
Sbjct: 61 ctaaatag 68
>30207_ptr-mir-122:mirbase
Length = 84
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 6 cagagctgtggagtgtgacaatggtgtttgtgtctaaattatcaaacgccattatcacac 65
Query: 64 taaatagctac 74
|||||||||||
Sbjct: 66 taaatagctac 76
>31837_mmu-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 7e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 7 agctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacactaa 66
|||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaaccatcaaacgccattatcacactaa 60
Query: 67 atagct 72
||||||
Sbjct: 61 atagct 66
>26685_cfa-mir-122:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 tggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacactaaata 69
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 58
>34270_dre-mir-122:mirbase
Length = 76
Score = 81.8 bits (41), Expect = 6e-17
Identities = 66/72 (91%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 2 tccagagctgtggagtgtgacaatggtgtttgtttc--ctgcctatcaaacgccattatc 59
||||||||||||||||||||||||||||||||| || ||| | |||||||||||||||
Sbjct: 1 tccagagctgtggagtgtgacaatggtgtttgtatcatctgtc-gtcaaacgccattatc 59
Query: 60 acactaaatagc 71
||||||||||||
Sbjct: 60 acactaaatagc 71
>25762_xtr-mir-122:mirbase
Length = 69
Score = 73.8 bits (37), Expect = 2e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 6 gagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacacta 65
||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 gagctatggagtgtgacaatggtgtttgtgtcagagctatcaaacgccattatcacacta 60
Query: 66 a 66
|
Sbjct: 61 a 61
>32716_rno-mir-122:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 2e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 7 cagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacac 66
Query: 64 taaatagctac 74
|||| ||||||
Sbjct: 67 taaacagctac 77
>33091_rno-mir-3591:mirbase
Length = 109
Score = 69.9 bits (35), Expect = 2e-13
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 4 cagagctgtggagtgtgacaatggtgtttgtttcctgcctatcaaacgccattatcacac 63
||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 90 cagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacac 31
Query: 64 taaatagctac 74
|||| ||||||
Sbjct: 30 taaacagctac 20
