miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>34752_tni-mir-144:mirbase
          Length = 74

 Score =  139 bits (70), Expect = 3e-34
 Identities = 73/74 (98%)
 Strand = Plus / Plus

                                                                      
Query: 4  ccctggacaggatatcatcttatactgtaagtttaataaagagacactacagtatagatg 63
          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1  ccctggacaggatatcatcttatactgtaagtttaataaagtgacactacagtatagatg 60

                        
Query: 64 atgtactatccagg 77
          ||||||||||||||
Sbjct: 61 atgtactatccagg 74




>34605_fru-mir-144:mirbase
          Length = 73

 Score =  129 bits (65), Expect = 3e-31
 Identities = 71/73 (97%)
 Strand = Plus / Plus

                                                                      
Query: 5  cctggacaggatatcatcttatactgtaagtttaataaagagacactacagtatagatga 64
          ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1  cctggacaggatatcatctaatactgtaagtttattaaagagacactacagtatagatga 60

                       
Query: 65 tgtactatccagg 77
          |||||||||||||
Sbjct: 61 tgtactatccagg 73




>34316_dre-mir-144:mirbase
          Length = 89

 Score = 99.6 bits (50), Expect = 3e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 9  gacaggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgta 68
          |||||||||||||| ||||||||||||| | ||  |||||||||||||||||||||||||
Sbjct: 9  gacaggatatcatcgtatactgtaagttcattattgagacactacagtatagatgatgta 68

                    
Query: 69 ctatccaggg 78
          ||||||||||
Sbjct: 69 ctatccaggg 78




>25964_gga-mir-144:mirbase
          Length = 85

 Score = 71.9 bits (36), Expect = 6e-14
 Identities = 61/68 (89%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                      
Query: 3  gccctggacaggatatcatcttatactgtaagtttaataaagagacactacagtatagat 62
          ||||||| | |||||||||| ||||||||||||| | ||  |||||||||||||||||||
Sbjct: 7  gccctgggctggatatcatcatatactgtaagttcactat-gagacactacagtatagat 65

                  
Query: 63 gatgtact 70
          ||||||||
Sbjct: 66 gatgtact 73




>27749_mml-mir-144:mirbase
          Length = 86

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||  | | ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttg-tgatgagacactacagtatagatgatgtacta 72




>28215_mne-mir-144:mirbase
          Length = 86

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||  | | ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttg-tgatgagacactacagtatagatgatgtacta 72




>31501_oan-mir-144:mirbase
          Length = 135

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13  ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
           |||||||||| ||||||||||||||  ||  ||||||||||||||||||||||||||||
Sbjct: 50  ggatatcatcgtatactgtaagtttgctat-gagacactacagtatagatgatgtacta 107




>31877_mmu-mir-144:mirbase
          Length = 66

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||  | | ||||||||||||||||||||||||||||
Sbjct: 6  ggatatcatcatatactgtaagtttg-tgatgagacactacagtatagatgatgtacta 63




>32750_rno-mir-144:mirbase
          Length = 83

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||  | | ||||||||||||||||||||||||||||
Sbjct: 13 ggatatcatcatatactgtaagtttg-tgatgagacactacagtatagatgatgtacta 70




>33230_bta-mir-144:mirbase
          Length = 84

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   || ||||||||||||||||||||||||||||
Sbjct: 13 ggatatcatcatatactgtaagtttgc-aacgagacactacagtatagatgatgtacta 70




>27392_mdo-mir-144:mirbase
          Length = 85

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                    
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtact 70
          |||||||||| ||||||||||||||   || |||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcgtatactgtaagtttgc-aatgagacactacagtatagatgatgtact 71




>26474_tgu-mir-144:mirbase
          Length = 70

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 54/60 (90%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 caggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtact 70
          |||||||||||| |||||||||||||   ||  |||||||||||||||||||||||||||
Sbjct: 2  caggatatcatcgtatactgtaagttggctat-gagacactacagtatagatgatgtact 60




>25793_xtr-mir-144:mirbase
          Length = 62

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||  |  | |||||||||||||||||||||||||||
Sbjct: 5  ggatatcatcatatactgtaagtttgtttta-agacactacagtatagatgatgtacta 62




>27044_eca-mir-144:mirbase
          Length = 66

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   |  ||||||||||||||||||||||||||||
Sbjct: 6  ggatatcatcatatactgtaagtttgcgat-gagacactacagtatagatgatgtacta 63




>28464_hsa-mir-144:mirbase
          Length = 86

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   |  ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgat-gagacactacagtatagatgatgtacta 72




>30099_ppa-mir-144:mirbase
          Length = 86

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   |  ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgat-gagacactacagtatagatgatgtacta 72




>30236_ptr-mir-144:mirbase
          Length = 86

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   |  ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgat-gagacactacagtatagatgatgtacta 72




>30848_ppy-mir-144:mirbase
          Length = 86

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 13 ggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          |||||||||| ||||||||||||||   |  ||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgat-gagacactacagtatagatgatgtacta 72




>26718_cfa-mir-144:mirbase
          Length = 60

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 53/60 (88%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                      
Query: 12 aggatatcatcttatactgtaagtttaataaagagacactacagtatagatgatgtacta 71
          ||||||||||| ||||||||||||||   | | ||| |||||||||||||||||||||||
Sbjct: 1  aggatatcatcatatactgtaagtttgcgaca-agatactacagtatagatgatgtacta 59