miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 67
Query: 61 acagtagtctgcacattggttagactgggcaagggaaagc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acagtagtctgcacattggttagactgggcaagggaaagc 107
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 64
Query: 61 acagtagtctgcacattggttagactgggcaagggaaagc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttagactgggcaagggaaagc 104
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 64
Query: 61 acagtagtctgcacattggttagactgggcaagggaaagc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttagactgggcaagggaaagc 104
>31527_oan-mir-199:mirbase
Length = 118
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ccggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgt 69
Query: 61 acagtagtctgcacattggttagactgggcaagggaaagc 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acagtagtctgcacattggttagactgggcaagggaaagc 109
>27582_lla-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>27623_sla-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>28231_mne-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggga 105
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>32786_rno-mir-199a:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>32787_rno-mir-199a:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 3 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12 ggagatcctgctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtac 71
Query: 63 agtagtctgcacattggttagactgggcaaggg 95
|||||||||||||||||||||||||||||||||
Sbjct: 72 agtagtctgcacattggttagactgggcaaggg 104
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 9 cctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagt 65
Query: 69 ctgcacattggttagactgggcaaggga 96
||||||||||||||||||||||| ||||
Sbjct: 66 ctgcacattggttagactgggcatggga 93
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 143 bits (72), Expect = 3e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 14 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 73
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 60
Query: 74 cattggttagactggg 89
||||||||||||||||
Sbjct: 61 cattggttagactggg 76
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 8 tcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtag 67
|||||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 1 tcctgctccgtcatcccagtgttcagactacctgttcaggatcatactggtgtacagtag 60
Query: 68 tctgcacattggttagactg 87
||||||||||||||||||||
Sbjct: 61 tctgcacattggttagactg 80
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 23 ccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggt 80
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggt 80
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>25517_pma-mir-199a:mirbase
Length = 79
Score = 99.6 bits (50), Expect = 4e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 14 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 73
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
Query: 74 cattggttagactg 87
||||||||||||||
Sbjct: 63 cattggttagactg 76
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 8 tcctgctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtag 67
|||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 1 tcctgctccgtcatcccagtgttcagactacctgttcaggattttactggtgtacagtag 60
Query: 68 tctgcacattggttagac 85
||||||||||||||||||
Sbjct: 61 tctgcacattggttagac 78
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 12 gctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctg 71
|||||||| |||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct: 4 gctccgtccacccagtgttcagactacctgttcattgtcatactggtgtacagtagtctg 63
Query: 72 cacattggttagactgggca 91
||||||||||||||||||||
Sbjct: 64 cacattggttagactgggca 83
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 85.7 bits (43), Expect = 6e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 13 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 72
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
Query: 73 acattggttag 83
|||||||||||
Sbjct: 66 acattggttag 76
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 82 ag 83
||
Sbjct: 62 ag 63
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 82 ag 83
||
Sbjct: 62 ag 63
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 75.8 bits (38), Expect = 5e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 82 ag 83
||
Sbjct: 68 ag 69
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 75.8 bits (38), Expect = 5e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 82 ag 83
||
Sbjct: 68 ag 69
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 71.9 bits (36), Expect = 8e-14
Identities = 62/68 (91%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgtt-gtacagtagtctgcacattggt 80
||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||
Sbjct: 30 cccagtgttcagactacctgttcagga-attagtgtttgtacagtagtctgcacattggt 88
Query: 81 tagactgg 88
||| ||||
Sbjct: 89 taggctgg 96
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 13 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 72
||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||
Sbjct: 6 ctccgtctacccagtgtttagactatctgttcaggactccaatattgtacagtagtctgc 65
Query: 73 acattggttagactgggc 90
||||||||||| ||||||
Sbjct: 66 acattggttaggctgggc 83
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 13 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 72
||||||| ||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 17 ctccgtctacccagtgtttagactacctgttcaggactcccaaattgtacagtagtctgc 76
Query: 73 acattggttagactgggc 90
||||||||||| ||||||
Sbjct: 77 acattggttaggctgggc 94
>25518_pma-mir-199b:mirbase
Length = 80
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttagactggg 89
||||||||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttagactggg 79
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctgggc 94
>33276_bta-mir-199b:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
||||||||||||||||||||||||||| ||||||
Sbjct: 51 ttgtacagtagtctgcacattggttaggctgggc 84
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttagactgggc 90
|||||||||||||||||||||||||| ||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctgggc 80
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttagactgggc 90
|||||||||||||||||||||||||| ||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctgggc 80
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 16 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 75
Query: 82 agactgggc 90
|| ||||||
Sbjct: 76 aggctgggc 84
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga------caatgctgttgtacagtagtctgcaca 75
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 76 ttggttag 83
||||||||
Sbjct: 62 ttggttag 69
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga------caatgctgttgtacagtagtctgcaca 75
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 76 ttggttag 83
||||||||
Sbjct: 62 ttggttag 69
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%), Gaps = 10/68 (14%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga------caatgctgttgtacagtagtctgcaca 75
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg----tgtacagtagtctgcaca 61
Query: 76 ttggttag 83
||||||||
Sbjct: 62 ttggttag 69
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 58 tgtacagtagtctgcacattggttagactggg 89
|||||||||||||||||||||||||| |||||
Sbjct: 32 tgtacagtagtctgcacattggttaggctggg 1
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgg 88
||||||||||||||||||||||||||| ||||
Sbjct: 43 ttgtacagtagtctgcacattggttaggctgg 74
>27085_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttag 83
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>27086_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttag 83
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga 48
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttag 83
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga 48
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttag 83
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga 48
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagga 48
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 57 ttgtacagtagtctgcacattggttag 83
|||||||||||||||||||||||||||
Sbjct: 31 ttgtacagtagtctgcacattggttag 5
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
|||||||||| |||||||||||||||| ||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctgggc 95
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggttagactgggc 90
|||||||||| |||||||||||||||| ||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctgggc 95
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagg 47
||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagg 31
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttag 83
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcagg 47
||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagg 31
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggttag 83
||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttag 69
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 ccagtgttcagactacctgttcagg 47
|||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagg 25
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattggtt 81
||||||||||||||||||||||||
Sbjct: 38 tgtacagtagtctgcacattggtt 61
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 ttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||||
Sbjct: 35 ttgtacagtagtctgcacattggtt 59
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 17 cccagtgttcagactacctgttcatcagactaaagctgaacagtagtctgcacattggtt 76
Query: 82 a 82
|
Sbjct: 77 a 77
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 22 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 81
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcatcagactcaagctgaacagtagtctgcacattggtt 74
Query: 82 a 82
|
Sbjct: 75 a 75
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgtacagtagtctgcacattgg 79
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ccccagtgttcagactacctgttc 44
|||||||||||||||||| |||||
Sbjct: 30 ccccagtgttcagactacgtgttc 53
