miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26379_tgu-let-7b:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tctaacaggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctaacaggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagg 60
Query: 61 agataactatacaacctactgccttccctgat 92
||||||||||||||||||||||||||||||||
Sbjct: 61 agataactatacaacctactgccttccctgat 92
>25871_gga-let-7b:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 60
Query: 66 actatacaacctactgccttccctg 90
|||||||||||||||||||||||||
Sbjct: 61 actatacaacctactgccttccctg 85
>27321_mdo-let-7b:mirbase
Length = 88
Score = 153 bits (77), Expect = 3e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcagaagataactat 67
Query: 71 acaacctactgccttccctga 91
|||||||||||||||||||||
Sbjct: 68 acaacctactgccttccctga 88
>31410_oan-let-7b:mirbase
Length = 82
Score = 137 bits (69), Expect = 2e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataac 67
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 2 ggatgaggtagtaggttgtgtggtttcaggggagtgattttgccccaatcagaagataac 61
Query: 68 tatacaacctactgccttccc 88
|||||| ||||||||||||||
Sbjct: 62 tatacagcctactgccttccc 82
>34528_fru-let-7b:mirbase
Length = 84
Score = 129 bits (65), Expect = 4e-31
Identities = 81/85 (95%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 65
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 1 cagggtgaggtagtaggttgtgtggtttcagggttgtgattttgcccc-atcaggagcta 59
Query: 66 actatacaacctactgccttccctg 90
|||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctg 84
>34676_tni-let-7b:mirbase
Length = 84
Score = 129 bits (65), Expect = 4e-31
Identities = 81/85 (95%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 65
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 1 cagggtgaggtagtaggttgtgtggtttcagggttgtgattttgcccc-atcaggagcta 59
Query: 66 actatacaacctactgccttccctg 90
|||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctg 84
>34171_dre-let-7b:mirbase
Length = 94
Score = 125 bits (63), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 5 acaggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagat 64
||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct: 5 acagggtgaggtagtaggttgtgtggtttcagggttgtgtttttgcccc-atcaggagtt 63
Query: 65 aactatacaacctactgccttccctga 91
|||||||||||||||||||||||||||
Sbjct: 64 aactatacaacctactgccttccctga 90
>27632_mml-let-7b:mirbase
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 63
Query: 71 acaacctactgccttccctg 90
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>30129_ptr-let-7b:mirbase
Length = 82
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 5 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 62
Query: 71 acaacctactgccttccctg 90
||||||||||||||||||||
Sbjct: 63 acaacctactgccttccctg 82
>30734_ppy-let-7b:mirbase
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
|||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcagaagataactat 63
Query: 71 acaacctactgccttccctg 90
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>31754_mmu-let-7b:mirbase
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagata 65
|||| |||||||||||||||||||||||||||| |||||| ||||||| || | |||||
Sbjct: 2 cagggtgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tccgaagata 59
Query: 66 actatacaacctactgccttccctga 91
||||||||||||||||||||||||||
Sbjct: 60 actatacaacctactgccttccctga 85
>28342_hsa-let-7b:mirbase
Length = 83
Score = 105 bits (53), Expect = 6e-24
Identities = 74/80 (92%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
|||||||||||||||||||||||||||| |||||| ||||||| || | ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggcagtgatgttgcccc--tcggaagataactat 63
Query: 71 acaacctactgccttccctg 90
||||||||||||||||||||
Sbjct: 64 acaacctactgccttccctg 83
>33111_bta-let-7b:mirbase
Length = 81
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggtagtgatgttgcccc-ctcggaagataactat 64
Query: 71 acaacctactgccttcc 87
|||||||||||||||||
Sbjct: 65 acaacctactgccttcc 81
>33789_bta-mir-3596:mirbase
Length = 83
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||
Sbjct: 81 tgaggtagtaggttgtgtggtttcagggtagtgatgttgcccc-ctcggaagataactat 23
Query: 71 acaacctactgccttcc 87
|||||||||||||||||
Sbjct: 22 acaacctactgccttcc 6
>32640_rno-let-7b:mirbase
Length = 85
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/81 (91%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
|||||||||||||||||||||||||||| |||||| | ||||| || | ||||||||||
Sbjct: 7 tgaggtagtaggttgtgtggtttcagggcagtgatgtcgcccc--tccgaagataactat 64
Query: 71 acaacctactgccttccctga 91
|||||||||||||||||||||
Sbjct: 65 acaacctactgccttccctga 85
>25874_gga-let-7f:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| |||||||| ||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtagggtagttattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>26384_tgu-let-7f:mirbase
Length = 92
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| |||||||| ||||| ||| |||||||||||||||
Sbjct: 11 tgaggtagtagattgtatagttgtagggtagttattttaccctgttcaggagataactat 70
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 71 acaatctattgccttccctga 91
>26934_eca-let-7f:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 6 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 65
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 66 acaatctattgccttccctga 86
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 66
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 67 acaatctattgccttccctga 87
>26610_cfa-let-7f:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtagtgattttaccctgttcaggagataactat 60
Query: 71 acaacctactgccttccc 88
|||| ||| |||||||||
Sbjct: 61 acaatctattgccttccc 78
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 67
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 68 acaatctattgccttccctga 88
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 67
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 68 acaatctattgccttccctga 88
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataactat 70
||||||||||| |||| | ||| ||||||||||||| ||| | |||||||||||||
Sbjct: 86 tgaggtagtagattgtatagttgtggggtagtgattttaccctgtttaggagataactat 27
Query: 71 acaacctactgccttccctga 91
|||| ||| ||||||||||||
Sbjct: 26 acaatctattgccttccctga 6
>26607_cfa-let-7b:mirbase
Length = 69
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcaggg 38
||||||||||||||||||||||||||||
Sbjct: 40 tgaggtagtaggttgtgtggtttcaggg 67
>34532_fru-let-7h:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 tcaggagataactatacaacctactgccttcc 87
|||||||||||||||||||| |||||||||||
Sbjct: 52 tcaggagataactatacaacttactgccttcc 83
>34680_tni-let-7h:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 58 aggagataactatacaacctactgccttcc 87
|||||||||||||||||| |||||||||||
Sbjct: 69 aggagataactatacaacttactgccttcc 98
>25753_xtr-mir-98:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 58 aggagataactatacaacctactgccttccctg 90
|||||||||||||||| | ||||||||||||||
Sbjct: 64 aggagataactatacagcttactgccttccctg 96
>31413_oan-let-7f-1:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 ggagataactatacaacctactgccttccctga 91
|||||||||||||||| ||| ||||||||||||
Sbjct: 79 ggagataactatacaatctattgccttccctga 111
>25409_pma-let-7a-2:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | ||||||||||
Sbjct: 14 ggatgaggtagtaggttgtatagtttcagggt 45
>26932_eca-let-7d:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | |||||||||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagataa 61
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>26994_eca-mir-98:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggaga 63
|||| |||||||||| ||||| | ||| |||||| |||||| |||||||| || |||
Sbjct: 17 cagggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaaga 76
Query: 64 taactatacaacctactgccttccctg 90
|||||||||||| |||| | |||||||
Sbjct: 77 taactatacaacttactactttccctg 103
>27322_mdo-let-7d:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 12 aggaagaggtagtaggttgcatagttttagggcagggattttgcccaca--aggagttaa 69
Query: 67 ctatacaacctactgcctt 85
||||||||||| |||||||
Sbjct: 70 ctatacaacctgctgcctt 88
>31411_oan-let-7d:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| ||||||||||| | || ||| | |||
Sbjct: 20 aggaagaggtagtaggttgcatagttttagggcagtgattttgctc--ataaggtgttaa 77
Query: 67 ctatacaacctactgcctt 85
||||||||||| |||||||
Sbjct: 78 ctatacaacctgctgcctt 96
>32705_rno-mir-98:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 68/82 (82%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 68
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 16 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaataagaagataact 75
Query: 69 atacaacctactgccttccctg 90
||||||| |||| | |||||||
Sbjct: 76 atacaacttactactttccctg 97
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ggagataactatacaacctactg 81
|||||||||||||||||||||||
Sbjct: 53 ggagataactatacaacctactg 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 8 ggatgaggtagtaggttgtatagttttagggt 39
>34178_dre-let-7f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 61 agataactatacaacctactgccttccctga 91
|||||||||||||| ||| ||||||||||||
Sbjct: 70 agataactatacaatctattgccttccctga 100
>28411_hsa-mir-98:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctactgccttccctg 90
|||||||| || ||||||||||||||| |||| | |||||||
Sbjct: 62 gccccaattagaagataactatacaacttactactttccctg 103
>30195_ptr-mir-98:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctactgccttccctg 90
|||||||| || ||||||||||||||| |||| | |||||||
Sbjct: 62 gccccaattagaagataactatacaacttactactttccctg 103
>34181_dre-let-7h:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 58 aggagataactatacaacctactgccttcc 87
||||||||||||||||| |||||||||||
Sbjct: 70 aggagataactatacaatttactgccttcc 99
>26672_cfa-mir-98:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 68
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
Query: 69 atacaacctact 80
||||||| ||||
Sbjct: 61 atacaacttact 72
>33955_ssc-mir-98:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 11 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 68
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
Query: 69 atacaacctact 80
||||||| ||||
Sbjct: 64 atacaacttact 75
>34173_dre-let-7c-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggtttc 34
|||| |||||||||||||||| |||||||
Sbjct: 10 caggctgaggtagtaggttgtatggtttc 38
>25678_xtr-let-7c:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggttt 33
|||| |||||||||||||||| ||||||
Sbjct: 11 caggttgaggtagtaggttgtatggttt 38
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
>25873_gga-let-7d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 58 aggagataactatacaacctactgcctt 85
||||| |||||||||||||| |||||||
Sbjct: 61 aggaggtaactatacaacctgctgcctt 88
>26377_tgu-let-7a-3:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 58 ggatgaggtagtaggttgtatagttttagggt 89
>26382_tgu-let-7d:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 58 aggagataactatacaacctactgcctt 85
||||| |||||||||||||| |||||||
Sbjct: 56 aggaggtaactatacaacctgctgcctt 83
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 12 ggatgaggtagtaggttgtatagttttagggt 43
>27500_age-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctact 80
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
>27634_mml-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>27701_mml-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctact 80
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>28291_ggo-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctact 80
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
>28344_hsa-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>30078_ppa-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctact 80
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 2 ggatgaggtagtaggttgtatagttttagggt 33
>30131_ptr-let-7d:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 3 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 60
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 61 ctatacgacctgctgcctt 79
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
>30736_ppy-let-7d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 4 aggaagaggtagtaggttgcatagttttagggcagggattttgccc--acaaggaggtaa 61
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 62 ctatacgacctgctgcctt 80
>30801_ppy-mir-98:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 49 gccccaatcaggagataactatacaacctact 80
|||||||| || ||||||||||||||| ||||
Sbjct: 42 gccccaattagaagataactatacaacttact 73
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
>31757_mmu-let-7d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 12 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 69
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 70 ctatacgacctgctgcctt 88
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 10 ggatgaggtagtaggttgtatagttttagggt 41
>32643_rno-let-7d:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 10 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 67
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 68 ctatacgacctgctgcctt 86
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 87 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggagttaa 30
Query: 67 ctatacaacctactgcctt 85
|||||| |||| |||||||
Sbjct: 29 ctatacgacctgctgcctt 11
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 3 ggatgaggtagtaggttgtatagttttagggt 34
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 ggatgaggtagtaggttgtgtggtttcagggt 39
||||||||||||||||||| | |||| |||||
Sbjct: 8 ggatgaggtagtaggttgtatagttttagggt 39
>34170_dre-let-7a-6:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 56 tcaggagataactatacaacctactgccttccctga 91
||||| |||||||||||| ||| ||||||||||||
Sbjct: 73 tcaggtgataactatacagtctattgccttccctga 108
>34172_dre-let-7c-1:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 caggatgaggtagtaggttgtgtggttt 33
|||| |||||||||||||||| ||||||
Sbjct: 18 caggctgaggtagtaggttgtatggttt 45
