miRNEST 2.0, an integrative microRNA resource :: BLAST
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 95.6 bits (48), Expect = 1e-20
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 14 ttatggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctg 73
|||||||||||||||||||||||||||||||||| | |||| ||| ||| |||||||||
Sbjct: 3 ttatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctg 62
Query: 74 agctatgaattccaca 89
|||||||||| |||||
Sbjct: 63 agctatgaatcccaca 78
>40338_rco-MIR159:mirbase
Length = 180
Score = 85.7 bits (43), Expect = 1e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 19 gagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagcta 78
||||||||||||||||||||||||||| ||| ||| | ||| ||||||||||||||||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 79 tgaattccaca 89
|| || |||||
Sbjct: 61 tggatcccaca 71
Score = 69.9 bits (35), Expect = 7e-13
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcattacc-tgagttgcatcatgttttg 175
||||||||||||||||||||| |||||||||| ||||||| || || ||| | ||||
Sbjct: 99 gataggcttgtggcttgcatatctcaggagcttcattaccttgtattagatccttgtttg 158
Query: 176 gattgaagggagctctaca 194
|||||||||||||||||||
Sbjct: 159 gattgaagggagctctaca 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 75.8 bits (38), Expect = 1e-14
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcattacctgag-ttgcatcatgttttg 175
||||||||||||||||||||| |||||||||||||||| | || || ||| | ||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttg 163
Query: 176 gattgaagggagctctacacct 197
||||||||||||||||||||||
Sbjct: 164 gattgaagggagctctacacct 185
Score = 67.9 bits (34), Expect = 3e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 17 tggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 74
||||||||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagct 77
|||||||||||||||||||||||||||| | | ||||| ||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atg 80
|||
Sbjct: 67 atg 69
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctcta 192
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagct 77
|||||||||||||||||||||||||||| | | ||||| ||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atg 80
|||
Sbjct: 67 atg 69
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctcta 192
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 80
|||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aattccacacttcta 95
|| ||||| |||||
Sbjct: 61 gatcccacagttcta 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 80
|||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aattccacacttcta 95
|| ||||| |||||
Sbjct: 61 gatcccacagttcta 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 67.9 bits (34), Expect = 3e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 14 ttatggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctg 73
||||| ||||||||||||||||||||||| || ||| || || ||| |||||||||||
Sbjct: 13 ttatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgctt 72
Query: 74 agctatgaattccacacttcta 95
||||||| || ||||| |||||
Sbjct: 73 agctatggatcccacagttcta 94
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacacc 196
|||||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctacacc 199
>40397_ahy-MIR159:mirbase
Length = 197
Score = 60.0 bits (30), Expect = 7e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 20 agtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctat 79
|||||||||||||||||||||| ||| | | ||| | ||| |||||||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 80 gaattccaca 89
| || |||||
Sbjct: 61 ggatcccaca 70
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctaca 179
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 1e-08
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 gggttatggagtggagctccttgaagtccaatagaagatgttgcta-ggttgattgagct 69
|||||| |||||||||||||||||||||||| ||| | | | || | ||| ||||||||
Sbjct: 1 gggttaaggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagct 60
Query: 70 gctgagctatgaattccaca 89
||||||||||| || |||||
Sbjct: 61 gctgagctatggatcccaca 80
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 gatgataggcttgtggcttgcata 137
||||||||||||||||||||||||
Sbjct: 122 gatgataggcttgtggcttgcata 145
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctctac 193
|||||||||||||||||||||||
Sbjct: 185 ttttggattgaagggagctctac 207
>41922_osa-MIR159f:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 173 ttggattgaagggagctctacacct 197
|||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacct 183
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 165 atcatgttttggattgaagggagctcta 192
||||| ||||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacaccttg 199
||||||||||||||||||||||| ||||
Sbjct: 152 tttggattgaagggagctctacatcttg 179
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacaccttggc 201
|||||||||||||||||||| || ||||||
Sbjct: 169 tttggattgaagggagctctgcatcttggc 198
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacaccttgg 200
|||||||||||||||||||| || |||||
Sbjct: 182 tttggattgaagggagctctgcatcttgg 210
