miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgtttagctgaatctgcgtcagtgtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 ttccgctagtctatgatgcagattcttcatctgtttagctgaatctgcgtcagtgtttca 82
Query: 61 gtgttacagacgaaggtctgcatcatagtcaagagga 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtgttacagacgaaggtctgcatcatagtcaagagga 119
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgtttagctgaatctgcgtcagtgtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 ttccgctagtctatgatgcagattcttcatctgtttagctgaatctgcgtcagtgtttca 82
Query: 61 gtgttacagacgaaggtctgcatcatagtcaagagga 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtgttacagacgaaggtctgcatcatagtcaagagga 119
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgttt 36
||||||||||||||||||||||||||||||||||||
Sbjct: 23 ttccgctagtctatgatgcagattcttcatctgttt 58
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 cagacgaaggtctgcatcatagtcaagagga 97
|||||||||||||||||||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagagga 111
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgttt 36
||||||||||||||||||||||||||||||||||||
Sbjct: 23 ttccgctagtctatgatgcagattcttcatctgttt 58
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 cagacgaaggtctgcatcatagtcaagagga 97
|||||||||||||||||||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagagga 111
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgttt 36
|||| |||| ||||||||||||||||||||||||||
Sbjct: 87 ttcctctagcctatgatgcagattcttcatctgttt 122
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 66 acagacgaaggtctgcatcatagtcaagagga 97
||||||||||||||||||||||| ||||||||
Sbjct: 147 acagacgaaggtctgcatcatagccaagagga 178
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttccgctagtctatgatgcagattcttcatctgttt 36
|||| |||| ||||||||||||||||||||||||||
Sbjct: 87 ttcctctagcctatgatgcagattcttcatctgttt 122
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 66 acagacgaaggtctgcatcatagtcaagagga 97
||||||||||||||||||||||| ||||||||
Sbjct: 147 acagacgaaggtctgcatcatagccaagagga 178
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 67 cagacgaaggtctgcatcatagtcaag 93
|||||||||||||||||||||||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatctgtttagctgaat 44
|||||||||||||||||||||||| | ||||||
Sbjct: 35 tatgatgcagattcttcatctgttgaactgaat 67
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 67 cagacgaaggtctgcatcatagtcaag 93
|||||||||||||||||||||||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatctgtttagctgaat 44
|||||||||||||||||||||||| | ||||||
Sbjct: 35 tatgatgcagattcttcatctgttgaactgaat 67
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 acagacgaaggtctgcatcatagtcaag 93
||||||||||||||||||||||| ||||
Sbjct: 147 acagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 acagacgaaggtctgcatcatagtcaag 93
||||||||||||||||||||||| ||||
Sbjct: 147 acagacgaaggtctgcatcatagccaag 174
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatctg 33
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatctg 33
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatct 32
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tatgatgcagattcttcatct 32
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
