miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39573_ppt-MIR1023a:mirbase
Length = 170
Score = 293 bits (148), Expect = 2e-80
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 1 gaccaccttgcagtttcatggcacactctctccatttctctaccgttcatgcagcggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaccaccttgcagtttcatggcacactctctccatttctctaccgttcatgcagcggttg 71
Query: 61 atcgattgggttgctggttgattgatcgatcgatggtcaggagttggaagagaattggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atcgattgggttgctggttgattgatcgatcgatggtcaggagttggaagagaattggag 131
Query: 121 agagtgcattgtgaattgcggggttgac 148
||||||||||||||||||||||||||||
Sbjct: 132 agagtgcattgtgaattgcggggttgac 159
>39572_ppt-MIR1023a:mirbase
Length = 170
Score = 293 bits (148), Expect = 2e-80
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 1 gaccaccttgcagtttcatggcacactctctccatttctctaccgttcatgcagcggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gaccaccttgcagtttcatggcacactctctccatttctctaccgttcatgcagcggttg 71
Query: 61 atcgattgggttgctggttgattgatcgatcgatggtcaggagttggaagagaattggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atcgattgggttgctggttgattgatcgatcgatggtcaggagttggaagagaattggag 131
Query: 121 agagtgcattgtgaattgcggggttgac 148
||||||||||||||||||||||||||||
Sbjct: 132 agagtgcattgtgaattgcggggttgac 159
>39575_ppt-MIR1023b:mirbase
Length = 172
Score = 56.0 bits (28), Expect = 8e-09
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 97 tcaggagttgga-agagaattggagagagtgcattgtgaattgc 139
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 109 tcaggagttggggagagaattgaagagagtgcattgtgaattgc 152
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 cttgcagtttcatggcacactctctccatttctct 41
|||||| ||||||| ||||||||||||||||||||
Sbjct: 18 cttgcaatttcatgacacactctctccatttctct 52
>39574_ppt-MIR1023b:mirbase
Length = 172
Score = 56.0 bits (28), Expect = 8e-09
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 97 tcaggagttgga-agagaattggagagagtgcattgtgaattgc 139
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 109 tcaggagttggggagagaattgaagagagtgcattgtgaattgc 152
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 cttgcagtttcatggcacactctctccatttctct 41
|||||| ||||||| ||||||||||||||||||||
Sbjct: 18 cttgcaatttcatgacacactctctccatttctct 52
