miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39499_ppt-MIR477f:mirbase
          Length = 127

 Score =  244 bits (123), Expect = 1e-65
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtttgtttttctccctcaaaggcttccaacaacaggagggtacaattccattgtggttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gtttgtttttctccctcaaaggcttccaacaacaggagggtacaattccattgtggttat 62

                                                                       
Query: 61  aacccatagttgaggtgtttttgctctctctgctgtcggaagccttcgagggagatgaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aacccatagttgaggtgtttttgctctctctgctgtcggaagccttcgagggagatgaaa 122

              
Query: 121 gaa 123
           |||
Sbjct: 123 gaa 125




>39501_ppt-MIR477g:mirbase
          Length = 128

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 5  gtttttctccctcaaaggcttccaacaacag 35
          |||||||||||||||||||||||||||||||
Sbjct: 7  gtttttctccctcaaaggcttccaacaacag 37



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 89  tctgctgtcggaagccttcgagggagatgaaagaa 123
           |||||||| ||||||||||| |||||| |||||||
Sbjct: 92  tctgctgttggaagccttcgtgggagacgaaagaa 126




>39500_ppt-MIR477g:mirbase
          Length = 128

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 5  gtttttctccctcaaaggcttccaacaacag 35
          |||||||||||||||||||||||||||||||
Sbjct: 7  gtttttctccctcaaaggcttccaacaacag 37



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 89  tctgctgtcggaagccttcgagggagatgaaagaa 123
           |||||||| ||||||||||| |||||| |||||||
Sbjct: 92  tctgctgttggaagccttcgtgggagacgaaagaa 126




>39502_ppt-MIR477h:mirbase
          Length = 155

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 1  gtttgtttttctccctcaaaggcttccaac 30
          ||||||||||||||||||||||||||||||
Sbjct: 22 gtttgtttttctccctcaaaggcttccaac 51




>39497_ppt-MIR477d:mirbase
          Length = 154

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 10 tctccctcaaaggcttccaacaacagg 36
          |||||||||||||||||||||||||||
Sbjct: 32 tctccctcaaaggcttccaacaacagg 58




>39498_ppt-MIR477e:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 10 tctccctcaaaggcttccaacaacagg 36
          |||||||||||||||||||||| ||||
Sbjct: 35 tctccctcaaaggcttccaacatcagg 61




>39495_ppt-MIR477b:mirbase
          Length = 170

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tctccctcaaaggcttccaaca 31
          ||||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaaca 56




>39494_ppt-MIR477a:mirbase
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tctccctcaaaggcttccaaca 31
          ||||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaaca 34




>39493_ppt-MIR477a:mirbase
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 tctccctcaaaggcttccaaca 31
          ||||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaaca 34




>39496_ppt-MIR477c:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tctccctcaaaggcttccaac 30
          |||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33




>41685_vvi-MIR477:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 10 tctccctcaaaggcttccaa 29
          ||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31