miRNEST 2.0, an integrative microRNA resource :: BLAST
>34283_dre-mir-126a:mirbase
Length = 101
Score = 115 bits (58), Expect = 8e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 19 ctgcttcccagctcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgt 78
||||||| ||| |||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 13 ctgcttcacagtccattattacttttggtacgcgctaggccagactcaaactcgtaccgt 72
Query: 79 gagtaataatgcactgtggcag 100
||||||||||||||||||||||
Sbjct: 73 gagtaataatgcactgtggcag 94
>34284_dre-mir-126b:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 7e-15
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 31 tcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||
Sbjct: 22 tcattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaatagtgc 80
Query: 91 actgtg 96
||||||
Sbjct: 81 actgtg 86
>34590_fru-mir-126:mirbase
Length = 63
Score = 69.9 bits (35), Expect = 4e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
|||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaataatgc 63
>34737_tni-mir-126:mirbase
Length = 63
Score = 69.9 bits (35), Expect = 4e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
|||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaataatgc 63
>26455_tgu-mir-126:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgca 91
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 64 cattattacttttggtacgcgctgtgaca-cttcaaactcgtaccgtgagtaataatgcg 122
Query: 92 ctgtggc 98
|||||||
Sbjct: 123 ctgtggc 129
>31481_oan-mir-126:mirbase
Length = 110
Score = 61.9 bits (31), Expect = 1e-10
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | || |||| ||||||||||||||||||||||
Sbjct: 29 cattattacttttggtacgcgctgtgac-gcttcaaactcgtaccgtgagtaataatgc 86
>25944_gga-mir-126:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 4e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgca 91
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgaca-cttcaaactcgtaccgtgagtaataatgcg 72
Query: 92 ctgtgg 97
||||||
Sbjct: 73 ctgtgg 78
>27377_mdo-mir-126:mirbase
Length = 69
Score = 56.0 bits (28), Expect = 6e-09
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 31 tcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
|||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 4 tcattattacttttggtacgcgctgtgac-acatcaaactcgtaccgtgagtaataatgc 62
>27721_mml-mir-126:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgca 91
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgaca-cttcaaactcgtaccgtgagtaataatgcg 73
Query: 92 ctgt 95
||||
Sbjct: 74 ctgt 77
>31847_mmu-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 27 cagctcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaata 86
|||| ||||||||||||||||||||||| | | | |||| ||||||||||||||||||
Sbjct: 4 cagcacattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaata 62
Query: 87 atgc 90
||||
Sbjct: 63 atgc 66
>31848_mmu-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 27 cagctcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaata 86
|||| ||||||||||||||||||||||| | | | |||| ||||||||||||||||||
Sbjct: 4 cagcacattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaata 62
Query: 87 atgc 90
||||
Sbjct: 63 atgc 66
>32725_rno-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 27 cagctcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaata 86
|||| ||||||||||||||||||||||| | | | |||| ||||||||||||||||||
Sbjct: 4 cagcacattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaata 62
Query: 87 atgc 90
||||
Sbjct: 63 atgc 66
>33060_rno-mir-3567:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 27 cagctcattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaata 86
|||| ||||||||||||||||||||||| | | | |||| ||||||||||||||||||
Sbjct: 91 cagcacattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaata 33
Query: 87 atgc 90
||||
Sbjct: 32 atgc 29
>33204_bta-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgca 91
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgaca-cttcaaactcgtaccgtgagtaataatgcg 67
Query: 92 ctgt 95
||||
Sbjct: 68 ctgt 71
>33973_ssc-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 6e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgca 91
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgaca-cttcaaactcgtaccgtgagtaataatgcg 67
Query: 92 ctgt 95
||||
Sbjct: 68 ctgt 71
>25767_xtr-mir-126:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 8 cattattacttttggtacgcgctgtgtc-acatcaaactcgtaccgtgagtaataatgc 65
>26692_cfa-mir-126:mirbase
Length = 59
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 1 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 58
>27013_eca-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 66
>27014_eca-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 66
>28434_hsa-mir-126:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 72
>30212_ptr-mir-126:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 71
>30821_ppy-mir-126:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 cattattacttttggtacgcgctaggcctgcctcaagctcgtaccgtgagtaataatgc 90
||||||||||||||||||||||| | | | |||| ||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgac-acttcaaactcgtaccgtgagtaataatgc 72
