miRNEST 2.0, an integrative microRNA resource :: BLAST
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 1 accagactcctgttcctgctgaactgagccagtgtttctgcagtactgtaatcagctcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 110 accagactcctgttcctgctgaactgagccagtgtttgcacagtactgtaatcagctcag 51
Query: 61 taggcacgggaggccag 77
|||||||||||||||||
Sbjct: 50 taggcacgggaggccag 34
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 71.9 bits (36), Expect = 6e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 5 gactcctgttcctgctgaactgagccagtgtttctgcagtactgta-atcagctcagtag 63
|||||||||||||||||||||||||||||| ||||| | |||| | |||||||||||||
Sbjct: 70 gactcctgttcctgctgaactgagccagtggttctgtacaactgcatatcagctcagtag 11
Query: 64 gcac 67
||||
Sbjct: 10 gcac 7
>26413_tgu-mir-24:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 127 gactcctgttcctgctgaactgagccagtgt 97
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 5 gactcctgttcctgctgaactgagccagtgt 35
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 5 gactcctgttcctgctgaactgagccagtgt 35
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtgt 37
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtgt 37
>33024_rno-mir-3074:mirbase
Length = 117
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 20 gactcctgttcctgctgaactgagccagtgt 50
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 gactcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||||
Sbjct: 78 gactcctgttcctgctgaactgagccagtgt 48
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 4 agactcctgttcctgctgaactgagccagt 33
||||||||||||||||||||||||||||||
Sbjct: 73 agactcctgttcctgctgaactgagccagt 44
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 5 gactcctgttcctgctgaactgagccagtg 34
||||||||||||||||||||||||||||||
Sbjct: 87 gactcctgttcctgctgaactgagccagtg 58
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtg 34
||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtg 36
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 5 gactcctgttcctgctgaactgagccagtg 34
||||||||||||||||||||||||||||||
Sbjct: 7 gactcctgttcctgctgaactgagccagtg 36
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 5 gactcctgttcctgctgaactgagccagtg 34
||||||||||||||||||||||||||||||
Sbjct: 87 gactcctgttcctgctgaactgagccagtg 58
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgt 39
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgt 39
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 67 ctcctgttcctgctgaactgagccagtgt 39
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>31442_oan-mir-24:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 actcctgttcctgctgaactgagccagtg 34
|||||||||||||||||||||||||||||
Sbjct: 77 actcctgttcctgctgaactgagccagtg 49
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagtgt 40
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 actcctgttcctgctgaactgagccagtg 34
|||||||||||||||||||||||||||||
Sbjct: 74 actcctgttcctgctgaactgagccagtg 46
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 tcctgttcctgctgaactgagccagtgt 35
||||||||||||||||||||||||||||
Sbjct: 73 tcctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 tcctgttcctgctgaactgagccagtgt 35
||||||||||||||||||||||||||||
Sbjct: 73 tcctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 6 actcctgttcctgctgaactgagccagt 33
||||||||||||||||||||||||||||
Sbjct: 79 actcctgttcctgctgaactgagccagt 52
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 6 actcctgttcctgctgaactgagccagt 33
||||||||||||||||||||||||||||
Sbjct: 79 actcctgttcctgctgaactgagccagt 52
>25444_pma-mir-24:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 4 agactcctgttcctgctgaactgagccagtg 34
||||| |||||||||||||||||||||||||
Sbjct: 85 agacttctgttcctgctgaactgagccagtg 55
>25908_gga-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagt 33
|||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagt 42
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 62 cctgttcctgctgaactgagccagtgt 36
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 7 ctcctgttcctgctgaactgagccagt 33
|||||||||||||||||||||||||||
Sbjct: 68 ctcctgttcctgctgaactgagccagt 42
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggag 72
|||||||||||||||||||||
Sbjct: 21 tcagctcagtaggcacgggag 1
>28270_ggo-mir-24:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagtgt 35
|||||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagtgt 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagt 33
|||||||||||||||||||||||||
Sbjct: 62 cctgttcctgctgaactgagccagt 38
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagt 33
|||||||||||||||||||||||||
Sbjct: 72 cctgttcctgctgaactgagccagt 48
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 52 tcagctcagtaggcacgggaggc 74
|||||||||||||||||||||||
Sbjct: 27 tcagctcagtaggcacgggaggc 5
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccagt 33
|||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccagt 49
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccag 32
||||||||||||||||||||||||
Sbjct: 78 cctgttcctgctgaactgagccag 55
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccag 32
||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccag 50
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 cctgttcctgctgaactgagccag 32
||||||||||||||||||||||||
Sbjct: 73 cctgttcctgctgaactgagccag 50
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 tcctgctgaactgagccagtgt 35
||||||||||||||||||||||
Sbjct: 57 tcctgctgaactgagccagtgt 36
>25660_xla-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 14 tcctgctgaactgagccag 32
|||||||||||||||||||
Sbjct: 62 tcctgctgaactgagccag 44
>25718_xtr-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 14 tcctgctgaactgagccag 32
|||||||||||||||||||
Sbjct: 62 tcctgctgaactgagccag 44
