miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35706_bmo-mir-2808a-1:mirbase
          Length = 78

 Score =  103 bits (52), Expect = 2e-23
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                      
Query: 1  ccactgagtttctcgccggatcttctcagtgggtcgcgtttccgatccggtggtagattc 60
          |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 74 ccactgagtttctcgccggatcttctcagtggatcgcgtttccgatccgatggtagattc 15




>35711_bmo-mir-2808e:mirbase
          Length = 109

 Score = 85.7 bits (43), Expect = 4e-18
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                      
Query: 1  ccactgagtttctcgccggatcttctcagtgggtcgcgtttccgatccggtggtagattc 60
          |||||||||| ||| ||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct: 92 ccactgagttactcaccggatcttctcagtgggtcgcgctaccgacccggtggtagattc 33

                 
Query: 61 agcgaag 67
           ||||||
Sbjct: 32 tgcgaag 26




>35710_bmo-mir-2808d:mirbase
          Length = 132

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                    
Query: 10 ttctcgccggatcttctcagtgggtcgcgtttccgatccggtggtagattcagcgaag 67
          |||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||
Sbjct: 94 ttctcgccggatcttctcagtgggtcgcatttccaatccggtcgtagattctgcgaag 37




>35614_bmo-mir-2748:mirbase
          Length = 94

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 45/46 (97%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                        
Query: 1  ccactgagttt-ctcgccggatcttctcagtgggtcgcgtttccga 45
          ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 46 ccactgagttttctcgccggatcttctcagtgggtcgcgtttccga 1




>35876_bmo-mir-3301:mirbase
          Length = 102

 Score = 65.9 bits (33), Expect = 4e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                       
Query: 5  tgagtttctcgccggatcttctcagtgggtcgcgtttccgatccg 49
          ||||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 43 tgagtttctcgccggatattctcagtgggtcgcgattccaatccg 87




>35707_bmo-mir-2808a-2:mirbase
          Length = 77

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 34 tcgcgtttccgatccggtggtagattc 60
          |||||||||||||||| ||||||||||
Sbjct: 41 tcgcgtttccgatccgatggtagattc 15



 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 43 cgatccggtggtagattcagcgaag 67
          |||||||||||||||||| ||||||
Sbjct: 39 cgatccggtggtagattctgcgaag 63




>35709_bmo-mir-2808c:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 43 cgatccggtggtagattcagcgaa 66
          ||||| ||||||||||||||||||
Sbjct: 44 cgatctggtggtagattcagcgaa 67