miRNEST 2.0, an integrative microRNA resource :: BLAST
>34283_dre-mir-126a:mirbase
Length = 101
Score = 115 bits (58), Expect = 5e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 8 gtccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaataat 67
||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct: 23 gtccattattacttttggtacgcgctaggccagactcaaactcgtaccgtgagtaataat 82
Query: 68 gcactgtggc 77
||||||||||
Sbjct: 83 gcactgtggc 92
>34284_dre-mir-126b:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 5 acggtccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaat 64
||||| |||||||||||||||||| | ||| |||| |||||| |||||||||||||||||
Sbjct: 17 acggttcattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaat 75
Query: 65 aatgcactgtg 75
| |||||||||
Sbjct: 76 agtgcactgtg 86
>34590_fru-mir-126:mirbase
Length = 63
Score = 71.9 bits (36), Expect = 6e-14
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 10 ccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaataatgc 69
||||||||||||||||||| | ||| |||| |||||| ||||||||||||||||||||||
Sbjct: 5 ccattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaataatgc 63
>34737_tni-mir-126:mirbase
Length = 63
Score = 71.9 bits (36), Expect = 6e-14
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 10 ccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaataatgc 69
||||||||||||||||||| | ||| |||| |||||| ||||||||||||||||||||||
Sbjct: 5 ccattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaataatgc 63
>26455_tgu-mir-126:mirbase
Length = 132
Score = 65.9 bits (33), Expect = 4e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 5 acggtccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaat 64
|||| ||||||||||||||||||| | || | || | ||||||||||||||||||||||
Sbjct: 58 acggcccattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaat 116
Query: 65 aatgcactgtggc 77
||||| |||||||
Sbjct: 117 aatgcgctgtggc 129
>25944_gga-mir-126:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 1e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 acggtccattattacttttggtactctctaggccagtctcaaactcgtaccgtgagtaat 64
|||| ||||||||||||||||||| | || | || | ||||||||||||||||||||||
Sbjct: 8 acggcccattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaat 66
Query: 65 aatgcactgtgg 76
||||| ||||||
Sbjct: 67 aatgcgctgtgg 78
>27721_mml-mir-126:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgcactgt 74
||||||||||||||||||||||||||| ||||
Sbjct: 46 tcaaactcgtaccgtgagtaataatgcgctgt 77
>33204_bta-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgcactgt 74
||||||||||||||||||||||||||| ||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgcgctgt 71
>33973_ssc-mir-126:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgcactgt 74
||||||||||||||||||||||||||| ||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgcgctgt 71
>25767_xtr-mir-126:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 39 tcaaactcgtaccgtgagtaataatgc 65
>26692_cfa-mir-126:mirbase
Length = 59
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 32 tcaaactcgtaccgtgagtaataatgc 58
>27013_eca-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgc 66
>27014_eca-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgc 66
>27377_mdo-mir-126:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 36 tcaaactcgtaccgtgagtaataatgc 62
>28434_hsa-mir-126:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 46 tcaaactcgtaccgtgagtaataatgc 72
>30212_ptr-mir-126:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 45 tcaaactcgtaccgtgagtaataatgc 71
>30821_ppy-mir-126:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 46 tcaaactcgtaccgtgagtaataatgc 72
>31481_oan-mir-126:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 60 tcaaactcgtaccgtgagtaataatgc 86
>31847_mmu-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgc 66
>31848_mmu-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgc 66
>32725_rno-mir-126:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 40 tcaaactcgtaccgtgagtaataatgc 66
>33060_rno-mir-3567:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 43 tcaaactcgtaccgtgagtaataatgc 69
|||||||||||||||||||||||||||
Sbjct: 55 tcaaactcgtaccgtgagtaataatgc 29
>24832_cin-mir-126:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 ctcgtaccgtgagtaataa 66
|||||||||||||||||||
Sbjct: 49 ctcgtaccgtgagtaataa 67
>25326_csa-mir-126:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 ctcgtaccgtgagtaataa 66
|||||||||||||||||||
Sbjct: 65 ctcgtaccgtgagtaataa 83
>25475_pma-mir-126:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 ctcgtaccgtgagtaataa 66
|||||||||||||||||||
Sbjct: 44 ctcgtaccgtgagtaataa 62
