miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34719_tni-mir-29b-2:mirbase
Length = 78
Score = 111 bits (56), Expect = 8e-26
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctagaaagatgccaacactctaagccaccatct 64
|||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||
Sbjct: 78 ccccaagaacactgatttcaaatggtgctagatagatgacaatactctaagccaccacct 19
Query: 65 gaaaccagcttccaag 80
||||||||||||||||
Sbjct: 18 gaaaccagcttccaag 3
>34572_fru-mir-29b-2:mirbase
Length = 74
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctagaaagatgccaacactctaagccaccatct 64
|||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||
Sbjct: 74 ccccaagaacactgatttcaaatggtgctagatagatgacaatactctaagccaccacct 15
Query: 65 gaaaccagcttcca 78
||||||||||||||
Sbjct: 14 gaaaccagcttcca 1
>26972_eca-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>27602_sla-mir-29b:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>27678_mml-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>28190_mne-mir-29b:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>28277_ggo-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>28389_hsa-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>30064_ppa-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>30174_ptr-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>30779_ppy-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>31804_mmu-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>32685_rno-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>33160_bta-mir-29b-2:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>34245_dre-mir-29b-2:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 caccccgagaacactgatttcaaatggtgctaga 36
|||||| |||||||||||||||||||||||||||
Sbjct: 87 caccccaagaacactgatttcaaatggtgctaga 54
>26971_eca-mir-29b:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>27494_age-mir-29b:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>27554_lla-mir-29b:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>27677_mml-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>28276_ggo-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>28388_hsa-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>30063_ppa-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>30173_ptr-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>30778_ppy-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>33159_bta-mir-29b-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>33936_ssc-mir-29b:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 80 ccccaagaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>34246_dre-mir-29b-3:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 84 ccccaagaacactgatttcaaatggtgctaga 53
>34718_tni-mir-29b-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 5 ccccgagaacactgatttcaaatggtgctaga 36
|||| |||||||||||||||||||||||||||
Sbjct: 79 ccccaagaacactgatttcaaatggtgctaga 48
>25728_xtr-mir-29b:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 75 agaacactgatttcaaatggtgctaga 49
>25912_gga-mir-29b-1:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 75 agaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>25913_gga-mir-29b-2:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 75 agaacactgatttcaaatggtgctaga 49
>26419_tgu-mir-29b-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 65 agaacactgatttcaaatggtgctaga 39
>26420_tgu-mir-29b-2:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 65 agaacactgatttcaaatggtgctaga 39
>27355_mdo-mir-29b:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 79 agaacactgatttcaaatggtgctaga 53
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 37 tctaaaccaccatatgaaaccagcttcc 10
>31448_oan-mir-29b-1:mirbase
Length = 121
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 100 agaacactgatttcaaatggtgctaga 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 58 tctaaaccaccatatgaaaccagcttcc 31
>31803_mmu-mir-29b-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 71 agaacactgatttcaaatggtgctaga 45
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 29 tctaaaccaccatatgaaaccagcttcc 2
>32684_rno-mir-29b-1:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 75 agaacactgatttcaaatggtgctaga 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 50 tctaagccaccatctgaaaccagcttcc 77
||||| ||||||| ||||||||||||||
Sbjct: 33 tctaaaccaccatatgaaaccagcttcc 6
>33086_rno-mir-3587:mirbase
Length = 63
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 34 agaacactgatttcaaatggtgctaga 60
>34571_fru-mir-29b-1:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 agaacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||||
Sbjct: 74 agaacactgatttcaaatggtgctaga 48
>25453_pma-mir-29c:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctagaa 37
||||||||||||||||||||||||||
Sbjct: 77 aacactgatttcaaatggtgctagaa 52
>26650_cfa-mir-29b-2:mirbase
Length = 66
Score = 52.0 bits (26), Expect = 6e-08
Identities = 58/67 (86%), Gaps = 5/67 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctag----aaagatgccaacactctaagccaccatctgaa 67
|||||||||||||||||||||||| ||||||| || | ||||||||||||| ||||
Sbjct: 66 aacactgatttcaaatggtgctagatacaaagatg-gaaaaatctaagccaccatgtgaa 8
Query: 68 accagct 74
|||||||
Sbjct: 7 accagct 1
>31449_oan-mir-29b-2:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 61/71 (85%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctagaaa----gatgccaacactctaagccaccatctgaa 67
||||||||||||||||||||||||| | |||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatggtgctagatacagagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>33163_bta-mir-29e:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 61/71 (85%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga----aagatgccaacactctaagccaccatctgaa 67
||||||||||||||||| ||||||| |||||| || | ||||||||||||| ||||
Sbjct: 74 aacactgatttcaaatgatgctagatacaaagatggaaaaa-tctaagccaccatgtgaa 16
Query: 68 accagcttcca 78
|||||||||||
Sbjct: 15 accagcttcca 5
>34244_dre-mir-29b-1:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 gaacactgatttcaaatggtgctaga 36
||||||||||||||||||||||||||
Sbjct: 75 gaacactgatttcaaatggtgctaga 50
>34868_sko-mir-29b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 gaacactgatttcaaatggtgctaga 36
||||||||||||||||||||||||||
Sbjct: 84 gaacactgatttcaaatggtgctaga 59
>26649_cfa-mir-29b-1:mirbase
Length = 65
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 aacactgatttcaaatggtgctaga 36
|||||||||||||||||||||||||
Sbjct: 65 aacactgatttcaaatggtgctaga 41
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||||||||||||||||
Sbjct: 82 cactgatttcaaatggtgctaga 60
>38855_lgi-mir-29:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctaga 36
||||||||||||||||||||||
Sbjct: 80 actgatttcaaatggtgctaga 59
>38735_cte-mir-29a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctaga 36
||||||||||||||||||||||
Sbjct: 80 actgatttcaaatggtgctaga 59
>25451_pma-mir-29a:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctaga 36
||||||||||||||||||||||
Sbjct: 69 actgatttcaaatggtgctaga 48
>38736_cte-mir-29b:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgcta 34
|||||||||||||||||||||
Sbjct: 81 cactgatttcaaatggtgcta 61
>25727_xtr-mir-29a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 69 gatttcaaatggtgctagaaa 49
>25911_gga-mir-29a:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 71 gatttcaaatggtgctagaaa 51
>26417_tgu-mir-29a-1:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 57 gatttcaaatggtgctagaaa 37
>27354_mdo-mir-29a:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 58 gatttcaaatggtgctagaaa 38
>31446_oan-mir-29a-1:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 86 gatttcaaatggtgctagaaa 66
>34243_dre-mir-29a-2:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 61 gatttcaaatggtgctagaaa 41
>34569_fru-mir-29a-1:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 61 gatttcaaatggtgctagaaa 41
>34716_tni-mir-29a-1:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaaa 38
|||||||||||||||||||||
Sbjct: 61 gatttcaaatggtgctagaaa 41
>35355_ame-mir-29b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctag 35
|||||||||||||||||||||
Sbjct: 86 actgatttcaaatggtgctag 66
>37574_ngi-mir-29b:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctag 35
|||||||||||||||||||||
Sbjct: 80 actgatttcaaatggtgctag 60
>37642_nvi-mir-29b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctag 35
|||||||||||||||||||||
Sbjct: 85 actgatttcaaatggtgctag 65
>25730_xtr-mir-29d:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 13 acactgatttcaaatggtgctaga 36
|||||||||||| |||||||||||
Sbjct: 70 acactgatttcatatggtgctaga 47
>34570_fru-mir-29a-2:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaa 37
||||||||||||||||||||
Sbjct: 100 gatttcaaatggtgctagaa 81
>34717_tni-mir-29a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctagaa 37
||||||||||||||||||||
Sbjct: 76 gatttcaaatggtgctagaa 57
>36128_dan-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctagaa 37
|||||||||| |||||||||||||
Sbjct: 84 cactgatttcgaatggtgctagaa 61
>36295_dgr-mir-285:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctagaa 37
|||||||||| |||||||||||||
Sbjct: 86 cactgatttcgaatggtgctagaa 63
>36803_dmo-mir-285:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctagaa 37
|||||||||| |||||||||||||
Sbjct: 87 cactgatttcgaatggtgctagaa 64
>37380_dvi-mir-285:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctagaa 37
|||||||||| |||||||||||||
Sbjct: 86 cactgatttcgaatggtgctagaa 63
>37459_dwi-mir-285:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctagaa 37
|||||||||| |||||||||||||
Sbjct: 81 cactgatttcgaatggtgctagaa 58
>24654_bfl-mir-29a:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctagaa 37
|||||||||| ||||||||||||
Sbjct: 80 actgatttcatatggtgctagaa 58
>25729_xtr-mir-29c:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 72 gatttcaaatggtgctaga 54
>25914_gga-mir-29c:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 71 gatttcaaatggtgctaga 53
>26418_tgu-mir-29a-2:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 57 gatttcaaatggtgctaga 39
>26652_cfa-mir-29c-2:mirbase
Length = 58
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 53 gatttcaaatggtgctaga 35
>26651_cfa-mir-29c-1:mirbase
Length = 58
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 53 gatttcaaatggtgctaga 35
>26973_eca-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>26974_eca-mir-29c-2:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>27679_mml-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>28390_hsa-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>30175_ptr-mir-29c:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>30780_ppy-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>31447_oan-mir-29a-2:mirbase
Length = 113
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 80 gatttcaaatggtgctaga 62
>31805_mmu-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>32686_rno-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>33045_rno-mir-3556b:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 30 gatttcaaatggtgctaga 48
>33161_bta-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>33162_bta-mir-29d:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>33937_ssc-mir-29c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 70 gatttcaaatggtgctaga 52
>34242_dre-mir-29a-1:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 18 gatttcaaatggtgctaga 36
|||||||||||||||||||
Sbjct: 97 gatttcaaatggtgctaga 79
>36206_der-mir-285:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>36434_dme-mir-285:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>36435_dme-mir-285:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>36960_dps-mir-285:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 85 cactgatttcgaatggtgctaga 63
>37166_dse-mir-285:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>37242_dsi-mir-285:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>37535_dya-mir-285:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 cactgatttcaaatggtgctaga 36
|||||||||| ||||||||||||
Sbjct: 84 cactgatttcgaatggtgctaga 62
>37717_tca-mir-29:mirbase
Length = 130
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctagaa 37
|||||||||| ||||||||||||
Sbjct: 96 actgatttcatatggtgctagaa 74
>37718_tca-mir-29:mirbase
Length = 130
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 15 actgatttcaaatggtgctagaa 37
|||||||||| ||||||||||||
Sbjct: 96 actgatttcatatggtgctagaa 74
