miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 134 ttgggtcccgccttgcatcaactgaataggagactgcggtga 175
           |||| |||||||||||||||||||||| |||||| |||||||
Sbjct: 121 ttggatcccgccttgcatcaactgaatcggagaccgcggtga 162



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 12 cggcggcctctcattcgcttggtgcaggtcggga 45
          |||||| |||| ||||||||||||||||||||||
Sbjct: 7  cggcggtctctaattcgcttggtgcaggtcggga 40




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 134 ttgggtcccgccttgcatcaactgaataggagactgcggtgaa 176
           |||| |||||||||||||||||||||| |||| | ||||||||
Sbjct: 82  ttggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 14 gcggcctctcattcgcttggtgcaggtcggga 45
          |||| |||| ||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcggga 38




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 12 cggcggcctctcattcgcttggtgcaggtcggga 45
          |||||| |||| ||||||||||||||||||||||
Sbjct: 7  cggcggtctctaattcgcttggtgcaggtcggga 40



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 134 ttgggtcccgccttgcatcaactgaataggagac 167
           |||| |||||||||||||||||||||| ||||||
Sbjct: 137 ttggatcccgccttgcatcaactgaatcggagac 170




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 12 cggcggcctctcattcgcttggtgcaggtcggga 45
          |||||| |||| ||||||||||||||||||||||
Sbjct: 6  cggcggtctctaattcgcttggtgcaggtcggga 39



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 134 ttgggtcccgccttgcatcaactgaataggagac 167
           |||| |||||||||||||||||||||| ||||||
Sbjct: 136 ttggatcccgccttgcatcaactgaatcggagac 169




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 12 cggcggcctctcattcgcttggtgcaggtcggga 45
          ||||||||||| | ||||||||||||||||||||
Sbjct: 4  cggcggcctctgactcgcttggtgcaggtcggga 37




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 139 tcccgccttgcatcaactgaataggagac 167
           |||||||||||||||||||||| ||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggagac 129



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 19 ctctcattcgcttggtgcaggtcggga 45
          |||| ||||||||||||||||||||||
Sbjct: 4  ctctaattcgcttggtgcaggtcggga 30




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 134 ttgggtcccgccttgcatcaactgaataggaga 166
           |||| |||||||||||||||||||||| |||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggaga 136



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 19 ctctcattcgcttggtgcaggtcggga 45
          |||| ||||||||||||||||||||||
Sbjct: 4  ctctaattcgcttggtgcaggtcggga 30




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 134 ttgggtcccgccttgcatcaactgaataggag 165
           |||| |||||||||||||||||||||| ||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggag 159



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 19 ctctcattcgcttggtgcaggtcggga 45
          |||| ||||||||||||||||||||||
Sbjct: 4  ctctgattcgcttggtgcaggtcggga 30




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 134 ttgggtcccgccttgcatcaactgaat 160
           |||| ||||||||||||||||||||||
Sbjct: 100 ttggatcccgccttgcatcaactgaat 126



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 attcgcttggtgcaggtcggga 45
          ||||||||||||||||||||||
Sbjct: 4  attcgcttggtgcaggtcggga 25




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 134 ttgggtcccgccttgcatcaactgaat 160
           |||| ||||||||||||||||||||||
Sbjct: 97  ttggatcccgccttgcatcaactgaat 123



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 attcgcttggtgcaggtcggga 45
          ||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcggga 37




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 134 ttgggtcccgccttgcatcaactgaat 160
           |||| ||||||||||||||||||||||
Sbjct: 103 ttggatcccgccttgcatcaactgaat 129



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 attcgcttggtgcaggtcggga 45
          ||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcggga 43




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 attcgcttggtgcaggtcggga 45
          ||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 attcgcttggtgcaggtcggga 45
          ||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcggga 62