miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34222_dre-mir-22a:mirbase
Length = 86
Score = 107 bits (54), Expect = 1e-24
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 2 gccaaccacaacagttcttcagctggcagctttagttggtaca-tatgacataaagcttg 60
||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 86 gccaaccacaacagttcttcagctggcagctttagctggtacacaaggacataaagcttg 27
Query: 61 ccagtgaagaactg 74
||||||||||||||
Sbjct: 26 ccagtgaagaactg 13
>34555_fru-mir-22a:mirbase
Length = 86
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 2 gccaaccacaacagttcttcagctggcagctttagttggtaca-tatgacataaagcttg 60
||||||||||||||||||||||||||||||||||| || | || | |||||||||||||
Sbjct: 86 gccaaccacaacagttcttcagctggcagctttagctgttgcacgaggacataaagcttg 27
Query: 61 ccagtgaagaactgatgtgggtc 83
|||||||||||||| ||| ||||
Sbjct: 26 ccagtgaagaactgctgtaggtc 4
>34703_tni-mir-22a:mirbase
Length = 86
Score = 77.8 bits (39), Expect = 1e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 6 accacaacagttcttcagctggcagctttagttggtaca-tatgacataaagcttgccag 64
||||||||||||||||||||||||||||||| | | || | |||||||||||||||||
Sbjct: 82 accacaacagttcttcagctggcagctttagcggttgcacgaggacataaagcttgccag 23
Query: 65 tgaagaactgatgtgggtc 83
|||||||||| ||| ||||
Sbjct: 22 tgaagaactgctgtaggtc 4
>31439_oan-mir-22:mirbase
Length = 122
Score = 61.9 bits (31), Expect = 7e-11
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| || | ||| |||||||||||| |||||
Sbjct: 97 caacagttcttcaactggcagctttagctgggac--aggacgtaaagcttgccactgaag 40
Query: 70 aactgatgtg 79
||||| ||||
Sbjct: 39 aactgctgtg 30
>26958_eca-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>27342_mdo-mir-22:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 13 cagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaagaac 72
|||||||||| ||||||||||||| ||| ||| ||||||||||| |||| ||||||||
Sbjct: 71 cagttcttcaactggcagctttagctgggacaa--gacataaagctcgccactgaagaac 14
Query: 73 tgatgtgg 80
|| |||||
Sbjct: 13 tgctgtgg 6
>27489_age-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>27549_lla-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>27664_mml-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>28181_mne-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>28373_hsa-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>30053_ppa-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>30160_ptr-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>30765_ppy-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>31402_lca-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>31788_mmu-mir-22:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 80 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 23
Query: 70 aact 73
||||
Sbjct: 22 aact 19
>32672_rno-mir-22:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 80 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 23
Query: 70 aact 73
||||
Sbjct: 22 aact 19
>33142_bta-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>33143_bta-mir-22:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>33790_bta-mir-3600:mirbase
Length = 81
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 8 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 65
Query: 70 aact 73
||||
Sbjct: 66 aact 69
>33924_ssc-mir-22:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 72 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 15
Query: 70 aact 73
||||
Sbjct: 14 aact 11
>33925_ssc-mir-22:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||
Sbjct: 72 caacagttcttcaactggcagctttagctgggtc--aggacataaagcttgccactgaag 15
Query: 70 aact 73
||||
Sbjct: 14 aact 11
>26636_cfa-mir-22:mirbase
Length = 60
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 12 acagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaagaa 71
||||||||||| ||||||||||||| ||| || |||||||||||||||| |||||||
Sbjct: 60 acagttcttcaactggcagctttagctgggtcag--gacataaagcttgccactgaagaa 3
Query: 72 ct 73
||
Sbjct: 2 ct 1
>25906_gga-mir-22:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatg-acataaagcttgccagtgaa 68
||||||||||||| ||||||||||||| | || | | | ||||||||||||||| ||||
Sbjct: 85 caacagttcttcaactggcagctttagctactagagaaggacataaagcttgccactgaa 26
Query: 69 gaactg 74
||||||
Sbjct: 25 gaactg 20
>34556_fru-mir-22b:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 cacaacagttcttcagctggcagctttagt-tggtacatatgacataaagcttgccagtg 66
|||||||| |||||| ||||||||||||| ||| || | ||||||||||| |||||||
Sbjct: 80 cacaacagctcttcaactggcagctttagcatgggtcagaggacataaagctagccagtg 21
Query: 67 aagaac 72
||||||
Sbjct: 20 aagaac 15
>27597_sla-mir-22:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 55/64 (85%), Gaps = 2/64 (3%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttagttggtacatatgacataaagcttgccagtgaag 69
||||||||||||| ||||||||||||| || | | |||||||||||||||| |||||
Sbjct: 76 caacagttcttcaactggcagctttagcggggtc--aggacataaagcttgccactgaag 19
Query: 70 aact 73
||||
Sbjct: 18 aact 15
>25712_xtr-mir-22:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 caacagttcttcagctggcagctttag 36
||||||||||||| |||||||||||||
Sbjct: 80 caacagttcttcaactggcagctttag 54
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 49 acataaagcttgccagtgaagaactg 74
||||||||||||||| ||||||||||
Sbjct: 41 acataaagcttgccactgaagaactg 16
>34223_dre-mir-22b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 7 ccacaacagttcttcagctggcagcttta 35
||||||||| |||||| ||||||||||||
Sbjct: 77 ccacaacagctcttcaactggcagcttta 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 49 acataaagcttgccagtgaagaac 72
|||||||||| |||||||||||||
Sbjct: 38 acataaagctagccagtgaagaac 15
>34704_tni-mir-22b:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 48 gacataaagcttgccagtgaagaac 72
||||||||||| |||||||||||||
Sbjct: 39 gacataaagctagccagtgaagaac 15
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 cacaacagttcttcagctggcagctttag 36
|||||||| |||||| |||||||||||||
Sbjct: 81 cacaacagctcttcaactggcagctttag 53
