miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33021_rno-mir-2985:mirbase
Length = 110
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 5 aaaggatcttcattagggtgggtggagtagtataacaatgtgccccatattgttatagta 64
|||||||| |||||| |||||||||| |||||||||||||||| | || |||||||||||
Sbjct: 13 aaaggatcctcattaaggtgggtggaatagtataacaatgtgctcaatgttgttatagta 72
Query: 65 tcccacctaccctgatgtg 83
|||||||||||||||||||
Sbjct: 73 tcccacctaccctgatgtg 91
>26590_tgu-mir-2985-1:mirbase
Length = 83
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 6 aaggatcttcattagggtgggtggagtagtataacaatgtgccccatattgttatagtat 65
|||||||||||||| |||||||||| |||||||||||| ||| || ||||||||||||
Sbjct: 1 aaggatcttcattaaggtgggtggaatagtataacaatatgctaaatgttgttatagtat 60
Query: 66 cccacctaccctgatgt 82
|||||||||||||||||
Sbjct: 61 cccacctaccctgatgt 77
>26591_tgu-mir-2985-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 cattagggtgggtggagtagtataacaat 43
||||| |||||||||| ||||||||||||
Sbjct: 10 cattaaggtgggtggaatagtataacaat 38
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 54 ttgttatagtatcccacctaccctgatgt 82
|||||||||||| |||||| |||||||||
Sbjct: 49 ttgttatagtattccaccttccctgatgt 77
