miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31464_oan-mir-92a-2:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgagg 74
|||||||||||||||||||||| ||||||||
Sbjct: 63 atggtattgcacttgtcccggcctgttgagg 93
>25928_gga-mir-92:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 45 tggtattgcacttgtcccggcttgttgagg 74
||||||||||||||||||||| ||||||||
Sbjct: 45 tggtattgcacttgtcccggcctgttgagg 74
>26436_tgu-mir-92-1:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 45 tggtattgcacttgtcccggcttgttgagg 74
||||||||||||||||||||| ||||||||
Sbjct: 38 tggtattgcacttgtcccggcctgttgagg 67
>27497_age-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>27558_lla-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>27605_sla-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>27695_mml-mir-92a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>28286_ggo-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>28405_hsa-mir-92a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>30073_ppa-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>30190_ptr-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>30795_ppy-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>31405_lca-mir-92-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>31819_mmu-mir-92a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 46 atggtattgcacttgtcccggcctgttgag 75
>33179_bta-mir-92a:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>33950_ssc-mir-92a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||||||| |||||||
Sbjct: 44 atggtattgcacttgtcccggcctgttgag 73
>27361_mdo-mir-92:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgag 73
||||||||||||||||||| |||||||
Sbjct: 47 gtattgcacttgtcccggcctgttgag 73
>32700_rno-mir-92a-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgag 73
||||||||||||||||||| |||||||
Sbjct: 47 gtattgcacttgtcccggcctgttgag 73
>34576_fru-mir-92-1:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 cttttctgtgcaggttgggagaggtgacaatgctc 35
|||| |||||||||||||||||||| ||||||||
Sbjct: 1 ctttcctgtgcaggttgggagaggtagcaatgctc 35
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 ggtattgcacttgtcccggcttgttgagga 75
|||||||||||||||||||| ||| |||||
Sbjct: 47 ggtattgcacttgtcccggcctgtggagga 76
>26666_cfa-mir-92a-1:mirbase
Length = 59
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggc 65
||||||||||||||||||||||
Sbjct: 34 atggtattgcacttgtcccggc 55
>26988_eca-mir-92a:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 atggtattgcacttgtcccggc 65
||||||||||||||||||||||
Sbjct: 36 atggtattgcacttgtcccggc 57
>24670_bfl-mir-92c:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 tattgcacttgtcccggcttg 68
|||||||||||||||||||||
Sbjct: 101 tattgcacttgtcccggcttg 121
>25661_xla-mir-92a-1:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgagga 75
||||||||||||||||||| |||| ||||
Sbjct: 48 gtattgcacttgtcccggcctgtttagga 76
>25747_xtr-mir-92a-1:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgagga 75
||||||||||||||||||| |||| ||||
Sbjct: 48 gtattgcacttgtcccggcctgtttagga 76
>26437_tgu-mir-92-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgagga 75
||||||||||||||||||| ||| |||||
Sbjct: 60 gtattgcacttgtcccggcctgtggagga 88
>31465_oan-mir-92b:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 45 tggtattgcacttgtcccggcttgttgag 73
|||||||||||||||||| || |||||||
Sbjct: 68 tggtattgcacttgtcccagcctgttgag 96
>34723_tni-mir-92-1:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 tggtattgcacttgtcccggc 65
|||||||||||||||||||||
Sbjct: 46 tggtattgcacttgtcccggc 66
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1 cttttctgtgcaggttgggagaggtgacaatgctc 35
|||| |||| ||||||||||||||| ||||||||
Sbjct: 1 ctttcctgtacaggttgggagaggtagcaatgctc 35
>31463_oan-mir-92a-1:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggcttgttgagg 74
||||||||||||||||||| ||| ||||
Sbjct: 71 gtattgcacttgtcccggcctgtggagg 98
>34256_dre-mir-92a-1:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 ggtattgcacttgtcccggc 65
||||||||||||||||||||
Sbjct: 52 ggtattgcacttgtcccggc 71
>34577_fru-mir-92-2:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 ggtattgcacttgtcccggc 65
||||||||||||||||||||
Sbjct: 36 ggtattgcacttgtcccggc 55
>34724_tni-mir-92-2:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 46 ggtattgcacttgtcccggc 65
||||||||||||||||||||
Sbjct: 45 ggtattgcacttgtcccggc 64
>24666_bfl-mir-92a-1:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 59 gtattgcacttgtcccggc 77
>25662_xla-mir-92a-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 48 gtattgcacttgtcccggc 66
>25748_xtr-mir-92a-2:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 45 gtattgcacttgtcccggc 63
>26667_cfa-mir-92a-2:mirbase
Length = 61
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 39 gtattgcacttgtcccggc 57
>26989_eca-mir-92a-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>27498_age-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>27559_lla-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>27606_sla-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>27696_mml-mir-92a-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>28198_mne-mir-92:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>28287_ggo-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>28406_hsa-mir-92a-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>30074_ppa-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>30191_ptr-mir-92-2:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 46 gtattgcacttgtcccggc 64
>30796_ppy-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>31406_lca-mir-92-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggc 65
>31820_mmu-mir-92a-2:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 54 gtattgcacttgtcccggc 72
>32701_rno-mir-92a-2:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 54 gtattgcacttgtcccggc 72
>33178_bta-mir-92:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 40 gtattgcacttgtcccggc 58
>33951_ssc-mir-92a-2:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 50 gtattgcacttgtcccggc 68
>34257_dre-mir-92a-2:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 gtattgcacttgtcccggc 65
|||||||||||||||||||
Sbjct: 54 gtattgcacttgtcccggc 72
