miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40448_gma-MIR168:mirbase
          Length = 125

 Score =  172 bits (87), Expect = 6e-44
 Identities = 114/123 (92%)
 Strand = Plus / Plus

                                                                       
Query: 38  cactgtgcggtctctaattcgcttggtgcaggtcgggaaccggtttctgcgcgaaatggt 97
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| 
Sbjct: 1   cactgtgcggtctctaattcgcttggtgcaggtcgggaaccggttttcgcgcggaatgga 60

                                                                       
Query: 98  gaagtggtagccggcggcgaattggatcccgccttgcatcaactgaatcggaggccgcag 157
           | || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61  ggagcggtcgccggcgccgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120

              
Query: 158 tga 160
           |||
Sbjct: 121 tga 123




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 115 cgaattggatcccgccttgcatcaactgaatcggaggccgcagtgaggg 163
           |||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtgaggg 165



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 44 gcggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||||||||||||||||||||||||||||
Sbjct: 9  gcggtctctaattcgcttggtgcaggtcgggaac 42




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 114 gcgaattggatcccgccttgcatcaactgaatcggagg 151
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcggagg 160



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 46 ggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||| ||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaac 32




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 114 gcgaattggatcccgccttgcatcaactgaatcggag 150
           |||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggag 168



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 44 gcggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||||||||||||||||||||||||||||
Sbjct: 9  gcggtctctaattcgcttggtgcaggtcgggaac 42




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 114 gcgaattggatcccgccttgcatcaactgaatcggag 150
           |||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggag 167



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 44 gcggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||||||||||||||||||||||||||||
Sbjct: 8  gcggtctctaattcgcttggtgcaggtcgggaac 41




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 69.9 bits (35), Expect = 7e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 116 gaattggatcccgccttgcatcaactgaatcggag 150
           |||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 46 ggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 46 ggtctctaattcgcttggtgcaggtcgggaaccg 79
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaaccg 34



 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 122 gatcccgccttgcatcaactgaatcggag 150
           |||||||||||||||||||||||||||||
Sbjct: 99  gatcccgccttgcatcaactgaatcggag 127




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 116 gaattggatcccgccttgcatcaactgaatcg 147
           ||||||||||||||||||||||||||||||||
Sbjct: 97  gaattggatcccgccttgcatcaactgaatcg 128



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 51 ctaattcgcttggtgcaggtcgggaac 77
          |||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaac 27




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 118 attggatcccgccttgcatcaactgaatcgga 149
           ||||||||||||||||||||||||||||||||
Sbjct: 96  attggatcccgccttgcatcaactgaatcgga 127



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 attcgcttggtgcaggtcgggaacc 78
          |||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 118 attggatcccgccttgcatcaactgaatcgga 149
           ||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 attcgcttggtgcaggtcgggaacc 78
          |||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||||||| ||||||||||
Sbjct: 63  ggatcccgccttgcatcaagtgaatcggag 92




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 44 gcggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||  ||||||||||||||||||||||||
Sbjct: 7  gcggtctcggattcgcttggtgcaggtcgggaac 40




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 44 gcggtctctaattcgcttggtgcaggtcgggaac 77
          ||||||||  ||||||||||||||||||||||||
Sbjct: 31 gcggtctcggattcgcttggtgcaggtcgggaac 64



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 122 gatcccgccttgcatcaactgaatcggag 150
           ||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 60  ggatcccgccttgcaccaagtgaatcggag 89




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 62  ggatcccgccttgcaccaagtgaatcggag 91




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 121 ggatcccgccttgcatcaactgaatcggag 150
           ||||||||||||||| ||| ||||||||||
Sbjct: 75  ggatcccgccttgcaccaagtgaatcggag 104




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tcgcttggtgcaggtcgggaac 77
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39