miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 101 bits (51), Expect = 1e-22
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 13 tgaagtcactggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacac 72
||||||||||||| ||||||||||||||||||||||||||| || | ||| ||| || |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt-gttgt-gaaaaaagc 58
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcgctcact 115
| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 59 agatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 99.6 bits (50), Expect = 5e-22
Identities = 87/97 (89%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 15 aagtcactggaggcagcggttcatcgatctcttcct--gaatttggctgtggaagaacac 72
|||||||||||||||||||||||||||||||||||| |||||||| |||| || | |||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatcac 65
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcg 109
| | || |||||| |||||||||||||||||||||||
Sbjct: 66 agaacatgaatcgatcgataaacctctgcatccagcg 102
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 89.7 bits (45), Expect = 5e-19
Identities = 86/96 (89%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaa 75
|||||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaa 81
Query: 76 g-caagaatcggtcgataaacctctgcatccagcgc 110
|| |||||| ||||||||||||||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccagcgc 117
>40663_mtr-MIR162:mirbase
Length = 124
Score = 83.8 bits (42), Expect = 3e-17
Identities = 89/102 (87%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 17 gtcactggaggcagcggttcatcgatctcttcctgaatttggct-gtggaagaacacaaa 75
||||||||| |||||||||||||||||| ||||||||||| | | || || |||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaattttgtttgtctcgtaaaacaaa 76
Query: 76 gcaagaatcggtcgataaacctctgcatccagcgctcacttt 117
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 77 -catgaatcggtcgataaacctctgcatccagcgctcacttt 117
>40437_gma-MIR162:mirbase
Length = 102
Score = 81.8 bits (41), Expect = 1e-16
Identities = 90/104 (86%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 12 gtgaagtcactggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaaca 71
|||||||||||||| ||||||||||||||||||||||||||| | | ||| || | ||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaa--tcgttgtttaacatca 58
Query: 72 caaagcaagaatcggtcgataaacctctgcatccagcgctcact 115
|| || |||||| |||||||||||||||||||||||||||||
Sbjct: 59 -gaaccatgaatcgatcgataaacctctgcatccagcgctcact 101
>41090_tcc-MIR162:mirbase
Length = 131
Score = 75.8 bits (38), Expect = 7e-15
Identities = 82/93 (88%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctg--aatttggctgtg-gaagaacacaaa 75
||||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaa 78
Query: 76 g-caagaatcggtcgataaacctctgcatccag 107
|| || ||| |||||||||||||||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>41220_csi-MIR162:mirbase
Length = 201
Score = 73.8 bits (37), Expect = 3e-14
Identities = 94/110 (85%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 12 gtgaagtcactggaggcagcggttcatcgatctcttcctg--aatttggctgtg--gaag 67
|||||||||||||||||||||||||||||||| ||| || ||||| | |||| ||
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaat 139
Query: 68 aacacaaa--gcaagaatcggtcgataaacctctgcatccagcgctcact 115
|||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 140 aacacaaaatacatgaatcgatcgataaacctctgcatccagcgctcact 189
>40025_ath-MIR162b:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcgct 111
||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 gtgaagtcactggaggcagcggttcatcgatc 43
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 14 gaagtcactggaggcagcggttcatcgatctcttcctg 51
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgct 111
|||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgct 102
>40342_rco-MIR162:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 18 tcactggaggcagcggttcatcgatctcttcctg 51
||||||||||||||||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 14 gaagtcactggaggcagcggttcatcgatctcttcctgaa 53
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 14 gaagtcactggaggcagcggttcatcgatctcttcctgaa 53
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 16 agtcactggaggcagcggttcatcgatctcttcctg 51
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcg 109
|||||| |||| | |||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 16 agtcactggaggcagcggttcatcgatctcttcctg 51
|||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcg 109
|||||| |||| | |||||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccagcg 158
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 73 aaagcaagaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcgct 137
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 gtgaagtcactggaggcagcggttcatcgatc 43
|||||||| |||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 6e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 71 acaaagcaagaatcggtcgataaacctctgcatccagcgctcacttt 117
|||| ||| |||||| ||||||| ||||||||||||| ||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctcacttt 134
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatcc 105
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
