miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31332_ppy-mir-1273:mirbase
          Length = 103

 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatccggcc 72
          |||||||||||||| || ||||||||||||| |||| |||||||||||  |||||  |||
Sbjct: 1  tgaggcaggagaattgcttgaacccgggaggtggaggttgcagtgagccaagatcacgcc 60

                            
Query: 73 actgcactccagcctggg 90
          ||||||||||||||||||
Sbjct: 61 actgcactccagcctggg 78




>29124_hsa-mir-1273:mirbase
          Length = 103

 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                       
Query: 13  tgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatccggcc 72
           |||||||||||||| || |||||||||| || |||| |||||||||||  ||||   |||
Sbjct: 1   tgaggcaggagaattgcttgaacccgggtggtggaggttgcagtgagccaagattgcgcc 60

                                            
Query: 73  actgcactccagcctgggcaacatagccagact 105
           ||||||||||||||||||| ||| ||| |||||
Sbjct: 61  actgcactccagcctgggcgacaaagcaagact 93




>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatccggcc 72
          |||||||||||||| || ||||||| ||| | ||||  |||||||||| ||||||  |||
Sbjct: 1  tgaggcaggagaattgcttgaacccaggaagtggaggctgcagtgagccgagatcgagcc 60

                            
Query: 73 actgcactccagcctggg 90
          |||| |||||||||||||
Sbjct: 61 actgtactccagcctggg 78




>30688_ptr-mir-1273:mirbase
          Length = 102

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                       
Query: 13  tgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatccggcc 72
           |||||||||| ||| || |||||| ||| || |||| |||||||||||  ||||   |||
Sbjct: 1   tgaggcaggaaaattgcttgaacctgggtggtggaggttgcagtgagccaagattgcgcc 60

                                            
Query: 73  actgcactccagcctgggcaacatagccagact 105
           ||||||||||||||||||| ||| ||| |||||
Sbjct: 61  actgcactccagcctgggcgacaaagcaagact 93




>28878_hsa-mir-566:mirbase
          Length = 94

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  tactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagc 60
          ||||| |||||||| ||||| ||||| || ||||||||||||||| || |||||||||||
Sbjct: 35 tactcaggaggctggggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 94




>30505_ptr-mir-566:mirbase
          Length = 93

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  tactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagc 60
          ||||| |||||||| ||||| ||||| || ||||||||||||||| || |||||||||||
Sbjct: 34 tactcaggaggctggggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 93




>31147_ppy-mir-566:mirbase
          Length = 90

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  tactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagc 60
          ||||| |||||||| ||||| ||||| || ||||||||||||||| || |||||||||||
Sbjct: 31 tactcaggaggctggggcagcagaattgcttgaacccgggaggcgaaggttgcagtgagc 90




>34143_ssc-mir-1285:mirbase
          Length = 80

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 70  gccactgcactccagcctgggcaacatagccagac 104
           ||||||| |||||||||||||||||||||| ||||
Sbjct: 33  gccactgtactccagcctgggcaacatagcgagac 67




>31314_ppy-mir-1254:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 70 gccactgcactccagcctgggcaaca 95
          |||||||||||||||||| |||||||
Sbjct: 55 gccactgcactccagcctaggcaaca 80




>29126_hsa-mir-1273d:mirbase
          Length = 86

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                  
Query: 51 tgcagtgagctgagatccggccactgcactccagcctggg 90
          ||||||||||  |||||  ||||||||||| |||||||||
Sbjct: 29 tgcagtgagccaagatcgtgccactgcacttcagcctggg 68




>29128_hsa-mir-1273f:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 42/48 (87%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                          
Query: 45 ggagcttgcagtgagctgagatccggccactgca-ctccagcctgggc 91
          |||| ||||||||||||||||||  || |||||| | |||||||||||
Sbjct: 31 ggaggttgcagtgagctgagatcacgcaactgcacccccagcctgggc 78




>29613_hsa-mir-4419a:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tactcgggaggctgaggcaggaga 24
          ||||||||||||||||| ||||||
Sbjct: 27 tactcgggaggctgagggaggaga 50