miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29122_hsa-mir-1271:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ctatgtgccaggcattgtgct 182
           |||||||||||||||||||||
Sbjct: 59  ctatgtgccaggcattgtgct 79




>30686_ptr-mir-1271:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ctatgtgccaggcattgtgct 182
           |||||||||||||||||||||
Sbjct: 58  ctatgtgccaggcattgtgct 78




>31331_ppy-mir-1271:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ctatgtgccaggcattgtgct 182
           |||||||||||||||||||||
Sbjct: 59  ctatgtgccaggcattgtgct 79




>33478_bta-mir-1271:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ctatgtgccaggcattgtgct 182
           |||||||||||||||||||||
Sbjct: 59  ctatgtgccaggcattgtgct 79




>34141_ssc-mir-1271:mirbase
          Length = 78

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ctatgtgccaggcattgtgct 182
           |||||||||||||||||||||
Sbjct: 55  ctatgtgccaggcattgtgct 75