miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27396_mdo-mir-147b:mirbase
          Length = 82

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 8  tctatgaatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaa 67
          ||||||||||||| |||||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 1  tctatgaatctagtggaaacatctccgcacaaactagactactgaaaccagtgtgcggaa 60

                                
Query: 68 gtgcttctgctacatttttagg 89
          ||||||||||||||||||||||
Sbjct: 61 gtgcttctgctacatttttagg 82




>26722_cfa-mir-147:mirbase
          Length = 86

 Score =  105 bits (53), Expect = 6e-24
 Identities = 77/85 (90%)
 Strand = Plus / Plus

                                                                      
Query: 6  actctatgaatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcgg 65
          ||||||||||||||| ||||||||| |||||||||||| | ||  || ||||||||||||
Sbjct: 1  actctatgaatctagtggaaacattgctgcacaaactagattatggataccagtgtgcgg 60

                                   
Query: 66 aagtgcttctgctacatttttaggg 90
          || ||||||||||||||||||||||
Sbjct: 61 aaatgcttctgctacatttttaggg 85




>26478_tgu-mir-147:mirbase
          Length = 70

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                      
Query: 22 ggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgcttctgctaca 81
          |||| ||||||||||||||||  |||||||||| |||||||||||| |||||||||||||
Sbjct: 5  ggaatcatttctgcacaaacttgactactgaaatcagtgtgcggaaatgcttctgctaca 64

                
Query: 82 ttttta 87
          ||||||
Sbjct: 65 ttttta 70




>28470_hsa-mir-147b:mirbase
          Length = 80

 Score = 87.7 bits (44), Expect = 1e-18
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| |||||||||||||||||||||| | |   || |||||||||||||| |||||
Sbjct: 5  aatctagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgctt 64

                          
Query: 74 ctgctacatttttagg 89
          ||||||||||||||||
Sbjct: 65 ctgctacatttttagg 80




>30241_ptr-mir-147b:mirbase
          Length = 79

 Score = 87.7 bits (44), Expect = 1e-18
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| |||||||||||||||||||||| | |   || |||||||||||||| |||||
Sbjct: 4  aatctagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgctt 63

                          
Query: 74 ctgctacatttttagg 89
          ||||||||||||||||
Sbjct: 64 ctgctacatttttagg 79




>30854_ppy-mir-147b:mirbase
          Length = 80

 Score = 87.7 bits (44), Expect = 1e-18
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| |||||||||||||||||||||| | |   || |||||||||||||| |||||
Sbjct: 5  aatctagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgctt 64

                          
Query: 74 ctgctacatttttagg 89
          ||||||||||||||||
Sbjct: 65 ctgctacatttttagg 80




>25969_gga-mir-147-1:mirbase
          Length = 70

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| |||| || |||||||||||||  |||||||||| |||||||||||| |||||
Sbjct: 1  aatctagtggaatcacttctgcacaaacttgactactgaaatcagtgtgcggaaatgctt 60

                    
Query: 74 ctgctacatt 83
          ||||||||||
Sbjct: 61 ctgctacatt 70




>25970_gga-mir-147-2:mirbase
          Length = 70

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| |||| || |||||||||||||  |||||||||| |||||||||||| |||||
Sbjct: 1  aatctagtggaatcacttctgcacaaacttgactactgaaatcagtgtgcggaaatgctt 60

                    
Query: 74 ctgctacatt 83
          ||||||||||
Sbjct: 61 ctgctacatt 70




>27755_mml-mir-147b:mirbase
          Length = 80

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                      
Query: 14 aatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagtgctt 73
          ||||||| ||||||||||| |||||||||| | |   || ||||||||||||||||||||
Sbjct: 5  aatctagtggaaacatttccgcacaaactagattctggacaccagtgtgcggaagtgctt 64

                          
Query: 74 ctgctacatttttagg 89
          ||||| ||||||||||
Sbjct: 65 ctgctgcatttttagg 80




>31881_mmu-mir-147:mirbase
          Length = 79

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 71/80 (88%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 tatgaatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagt 69
          ||||||||||| |||||||||||||||||||||| | |  |||  ||||||||||||| |
Sbjct: 1  tatgaatctagtggaaacatttctgcacaaactaga-tgttgatgccagtgtgcggaaat 59

                              
Query: 70 gcttctgctacatttttagg 89
          ||||||||||||||| ||||
Sbjct: 60 gcttctgctacatttgtagg 79




>33234_bta-mir-147:mirbase
          Length = 80

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                      
Query: 10 tatgaatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagt 69
          ||||||||||| ||||||| |||||||||  ||| | ||  || |||||||||||||| |
Sbjct: 1  tatgaatctagtggaaacacttctgcacaggctagattatggataccagtgtgcggaaat 60

                              
Query: 70 gcttctgctacatttttagg 89
          ||||||||||||||||||||
Sbjct: 61 gcttctgctacatttttagg 80




>32754_rno-mir-147:mirbase
          Length = 79

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 tatgaatctagcggaaacatttctgcacaaactatactactgaaaccagtgtgcggaagt 69
          ||||||||||| ||||||| |||||||||||||  | |  |||  ||||||||||||| |
Sbjct: 1  tatgaatctagtggaaacacttctgcacaaactcgattt-tgatgccagtgtgcggaaat 59

                              
Query: 70 gcttctgctacatttttagg 89
          ||||||||||||||||||||
Sbjct: 60 gcttctgctacatttttagg 79




>27049_eca-mir-147b:mirbase
          Length = 80

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 56 cagtgtgcggaagtgcttctgctacatttttagg 89
          |||||||| ||| |||||||||||||||||||||
Sbjct: 47 cagtgtgccgaaatgcttctgctacatttttagg 80




>27754_mml-mir-147a:mirbase
          Length = 72

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 45 actactgaaaccagtgtgcggaagtgcttctgctacatt 83
          |||| |||| |||||||| |||| |||||||||||||||
Sbjct: 34 actattgaagccagtgtgtggaaatgcttctgctacatt 72




>28217_mne-mir-147:mirbase
          Length = 72

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 45 actactgaaaccagtgtgcggaagtgcttctgctacatt 83
          |||| |||| |||||||| |||| |||||||||||||||
Sbjct: 34 actattgaagccagtgtgtggaaatgcttctgctacatt 72