miRNEST 2.0, an integrative microRNA resource :: BLAST
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 79.8 bits (40), Expect = 8e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 80 atcccacagtcctatc 95
|| |||||||||||||
Sbjct: 71 at-ccacagtcctatc 85
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 79.8 bits (40), Expect = 8e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 80 atcccacagtcctatc 95
|| |||||||||||||
Sbjct: 71 at-ccacagtcctatc 85
>40338_rco-MIR159:mirbase
Length = 180
Score = 77.8 bits (39), Expect = 3e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| ||||| |||||| ||||||||||| |||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 80 atcccacagtcctat 94
||||||||| |||||
Sbjct: 64 atcccacagccctat 78
Score = 69.9 bits (35), Expect = 7e-13
Identities = 75/86 (87%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 108 ggataggcttgcgggctccatatctcaggagcttcattacctttaaaagtagaatccttg 167
||||||||||| || | ||||||||||||||||||||||||| | |||| ||||||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagcttcattaccttgtat--taga-tccttg 154
Query: 168 tttggattggagggagctctacatct 193
||||||||| ||||||||||||||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 67.9 bits (34), Expect = 3e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||||||| |||| ||||||| ||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 80 atcccacagtcctatccc 97
||||||||| ||||||||
Sbjct: 69 atcccacagccctatccc 86
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 80 atcccacagt 89
||||||||||
Sbjct: 62 atcccacagt 71
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 161 atccttgtttggattggagggagctctac 189
|||||| ||||||||| ||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 80 atcccacagt 89
||||||||||
Sbjct: 62 atcccacagt 71
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 161 atccttgtttggattggagggagctctac 189
|||||| ||||||||| ||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| ||| ||| |||| |||||| |||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 80 atcccacagt 89
||||||||||
Sbjct: 81 atcccacagt 90
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 163 ccttgtttggattggagggagctctaca 190
|||| ||||||||| |||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>40397_ahy-MIR159:mirbase
Length = 197
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagtc-aatagagtttcttgctgggtatattgagctgcttggctatgg 79
||||||||||||||||| || |||| ||||| |||||| ||||||||||| |||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 80 atcccacagt 89
||||||||||
Sbjct: 63 atcccacagt 72
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 161 atccttgtttggattggagggagctctacat 191
|||||| ||||||||| ||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctctacat 180
>41218_csi-MIR159:mirbase
Length = 216
Score = 65.9 bits (33), Expect = 1e-11
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 16 aggaatggagctccttgaagtc-aatagagtttcttgct-gggtatattgagctgcttgg 73
|||| ||||||||||||||||| || |||| |||| || ||||| ||||||||||| |
Sbjct: 7 aggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgag 66
Query: 74 ctatggatcccacagtcctat 94
|||||||||||||||||||||
Sbjct: 67 ctatggatcccacagtcctat 87
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 56.0 bits (28), Expect = 1e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 21 tggagctccttgaagt-caatagagtttcttgctgggtatattgagctgcttggctatgg 79
|||||||||||||||| ||||||| || ||||||||| || |||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 80 atcccacagtcctatc 95
||||||||| ||||||
Sbjct: 71 atcccacagccctatc 86
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 catatctcaggagcttcattacct 149
|||||||||||||||| |||||||
Sbjct: 119 catatctcaggagctttattacct 142
>40435_gma-MIR159d:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 attgagctgcttggctatggatcccacagt 89
|||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacagt 36
>39804_aly-MIR159a:mirbase
Length = 222
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 168 tttggattggagggagctctacatcttct 196
||||||||| |||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatcttct 211
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 168 tttggattggagggagctctacatctt 194
||||||||| |||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacatctt 178
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 166 tgtttggattggagggagctctacatctt 194
||||||||||| |||||||||| ||||||
Sbjct: 180 tgtttggattgaagggagctctgcatctt 208
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 166 tgtttggattggagggagctctacatctt 194
||||||||||| |||||||||| ||||||
Sbjct: 9 tgtttggattgaagggagctctgcatctt 37
