miRNEST 2.0, an integrative microRNA resource :: BLAST
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 180 bits (91), Expect = 1e-46
Identities = 100/103 (97%)
Strand = Plus / Plus
Query: 4 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcg 63
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 9 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcg 68
Query: 64 taaaatacgatctcagattgagccgcgccaatatcactttcca 106
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 taaaatacgatctcagattgagccgcgccaatatcactttcca 111
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 127 bits (64), Expect = 2e-30
Identities = 88/95 (92%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 9 aaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaa 68
|||||||||||||||||||||||||||||||||||||||| || || ||| ||||||
Sbjct: 1 aaagcgatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaa 58
Query: 69 tacgatctcagattgagccgcgccaatatcacttt 103
|||||||||||||||||||||||||||||||||||
Sbjct: 59 tacgatctcagattgagccgcgccaatatcacttt 93
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%)
Strand = Plus / Plus
Query: 4 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcg 63
||||||||||||||||||||||||||||||||||||||||||||| | | | | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattg 60
Query: 64 taaaatacgatctcagattgagccgcgccaatatcactttc 104
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatacgatctcagattgagccgcgccaatatcactttc 101
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 105 bits (53), Expect = 7e-24
Identities = 88/100 (88%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 5 aaagaaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgt 64
|||| |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgt 56
Query: 65 aaaatacgatctcagattgagccgcgccaatatcactttc 104
||| |||||||| ||||||||||||||||||||||||||
Sbjct: 57 aaagaacgatctctgattgagccgcgccaatatcactttc 96
>40365_rco-MIR171g:mirbase
Length = 89
Score = 103 bits (52), Expect = 3e-23
Identities = 83/93 (89%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 11 agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 70
|||||||||||||||||||||||||||||||||||||| |||| || ||||| |
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaagga 56
Query: 71 cgatctcagattgagccgcgccaatatcacttt 103
|||||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcacttt 89
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 4 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcg 63
||||||||||||||||||||||||||||||||||||| ||||||| || | | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacagatttac---acgagtga-aag 56
Query: 64 taaaatacgatctcagattgagccgcgccaatatcacttt 103
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 taaaatccgatctcagattgagccgcgccaatatcacttt 96
>41541_sly-MIR171d:mirbase
Length = 112
Score = 85.7 bits (43), Expect = 6e-18
Identities = 82/93 (88%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 10 aagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaat 69
|||||||||||||||||||||||||||||||| ||||| | | ||| |||||||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaatttatg--cttatt--ttcgtaaaga 63
Query: 70 acgatctcagattgagccgcgccaatatcactt 102
|||||||||||||||||||||||||||||||||
Sbjct: 64 acgatctcagattgagccgcgccaatatcactt 96
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 1e-12
Identities = 83/98 (84%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 6 aagaaagcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgta 65
|||||||||||||||||||||||||||| ||||| |||||| | |||| | |||
Sbjct: 4 aagaaagcgatgttggtgaggttcaatctgaagattgatttatgc-ttgaat-----gta 57
Query: 66 aaatacgatctcagattgagccgcgccaatatcacttt 103
||| ||||||||||||||||||||||||||||||||
Sbjct: 58 aaaactgatctcagattgagccgcgccaatatcacttt 95
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 tcagattgagccgcgccaatatcactttc 104
|||||||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcactttc 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 gcgatgttggtgaggttcaatccgaaga 39
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 ctcagattgagccgcgccaatatcac 100
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 76 tcagattgagccgcgccaatatcac 100
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatcactt 102
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tctcagattgagccgcgccaatatcac 100
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 agcgatgttggtgaggttcaatccga 36
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatcac 100
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatcac 100
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatcac 100
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gattgagccgcgccaatatc 98
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 78 agattgagccgcgccaatatcact 101
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
