miRNEST 2.0, an integrative microRNA resource :: BLAST
>34800_tni-mir-429:mirbase
Length = 87
Score = 109 bits (55), Expect = 3e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 gcctgttaattggcgtcttaccagacatggttagatctgattatttgtgtctaatactgt 60
||||||| || ||||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 2 gcctgttgataggcgtcttaccagacatggttagatgtaattattgttgtctaatactgt 61
Query: 61 ctggtaatgccgtccatta 79
|||||||||||||||||||
Sbjct: 62 ctggtaatgccgtccatta 80
>34652_fru-mir-429:mirbase
Length = 76
Score = 103 bits (52), Expect = 2e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 2 cctgttaattggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtc 61
|||||| || ||||||||||||||||||||||||| | |||||| ||||||||||||||
Sbjct: 1 cctgttgataggcgtcttaccagacatggttagatgtaattattgttgtctaatactgtc 60
Query: 62 tggtaatgccgtccat 77
||||||||||||||||
Sbjct: 61 tggtaatgccgtccat 76
>34400_dre-mir-429:mirbase
Length = 82
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 14 cgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgt 73
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||
Sbjct: 13 cgtcttaccagacatggttagatgtaataacttgtgtctaatactgtctggtaatgccgt 72
Query: 74 ccat 77
||||
Sbjct: 73 ccat 76
>32910_rno-mir-429:mirbase
Length = 85
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgtc 74
||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacatggttagatctggatgtatctgtctaatactgtctggtaatgccgtc 75
Query: 75 cat 77
|||
Sbjct: 76 cat 78
>27176_eca-mir-429:mirbase
Length = 67
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 12 ggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgcc 71
|||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||
Sbjct: 2 ggcgtcttaccagacacggttagatctgcgtccttctgtctaatactgtctggtaatgcc 61
Query: 72 gtccat 77
||||||
Sbjct: 62 gtccat 67
>31552_oan-mir-429:mirbase
Length = 112
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 9 attggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaat 68
||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 21 attggtgtcttaccagacaaagttagatctgactattttcgtctaatactgtctggtaat 80
Query: 69 gccgtc 74
||||||
Sbjct: 81 gccgtc 86
>25673_xla-mir-429:mirbase
Length = 68
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgtc 74
||||||||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 6 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 65
Query: 75 cat 77
|||
Sbjct: 66 cat 68
>32069_mmu-mir-429:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgtc 74
||||||||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 14 gtcttaccagacatggttagatctggatgcatctgtctaatactgtctggtaatgccgtc 73
Query: 75 cat 77
|||
Sbjct: 74 cat 76
>26843_cfa-mir-429:mirbase
Length = 85
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 12 ggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgcc 71
|||||||||||||||| ||||||||||| | | |||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacacggttagatctgggttctggtgtctaatactgtctggtaatgcc 72
Query: 72 gt 73
||
Sbjct: 73 gt 74
>33372_bta-mir-429:mirbase
Length = 84
Score = 75.8 bits (38), Expect = 4e-15
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 ggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgcc 71
|||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacacggttagatctggtccttc-tgtctaatactgtctggtaatgcc 71
Query: 72 gtccat 77
||||||
Sbjct: 72 gtccat 77
>34094_ssc-mir-429:mirbase
Length = 81
Score = 71.9 bits (36), Expect = 7e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgtc 74
|||||||||| || ||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 14 gtcttaccaggcacggttagatctggttcttc-tgtctaatactgtctggtaatgccgtc 72
Query: 75 catt 78
||||
Sbjct: 73 catt 76
>27450_mdo-mir-429:mirbase
Length = 72
Score = 69.9 bits (35), Expect = 3e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 9 attggcgtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaat 68
||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 2 attggtgtcttaccagacaaagttagatctcgctatttctgtctaatactgtctggtaat 61
Query: 69 gcc 71
|||
Sbjct: 62 gcc 64
>26026_gga-mir-429:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgtc 74
|||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 15 gtcttaccaggcaaagttagatctagctatttctgtctaatactgtctggtaatgccgtc 74
>25860_xtr-mir-429:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 6e-11
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 15 gtcttaccagacatggttagatctgattatttgtgtctaatactgtctggtaatgccgt 73
||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 74
>28649_hsa-mir-429:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ggcgtcttaccagacatggttaga 35
||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacatggttaga 36
>31003_ppy-mir-429:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ggcgtcttaccagacatggttaga 35
||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacatggttaga 36
>27902_mml-mir-429:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 48 tgtctaatactgtctggtaatgccgtccat 77
|||||||||||||||||||| ||||||||
Sbjct: 47 tgtctaatactgtctggtaaaaccgtccat 76
>34401_dre-mir-429b:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 46 tgtgtctaatactgtctggtaatgcc 71
|||||||||||||| |||||||||||
Sbjct: 61 tgtgtctaatactgcctggtaatgcc 86
>24848_cin-mir-200:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 tgtgtctaatactgtctggtaatg 69
|||||||||||||| |||||||||
Sbjct: 44 tgtgtctaatactgcctggtaatg 67
>24868_cin-mir-3575:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 46 tgtgtctaatactgtctggtaatg 69
|||||||||||||| |||||||||
Sbjct: 29 tgtgtctaatactgcctggtaatg 6
>24869_cin-mir-3575:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 46 tgtgtctaatactgtctggtaatg 69
|||||||||||||| |||||||||
Sbjct: 29 tgtgtctaatactgcctggtaatg 6
>34889_sko-mir-200:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 50 tctaatactgtctggtaatg 69
||||||||||||||||||||
Sbjct: 59 tctaatactgtctggtaatg 78
>24693_bfl-mir-200b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 ctaatactgtctggtaatg 69
|||||||||||||||||||
Sbjct: 58 ctaatactgtctggtaatg 76
