miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34143_ssc-mir-1285:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 71 actgcactccagcctgggcaacatagcgagacc 103
|||| ||||||||||||||||||||||||||||
Sbjct: 36 actgtactccagcctgggcaacatagcgagacc 68
>29170_hsa-mir-1303:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ctgggcaacatagcgagacctca 106
|||||||||||||||||||||||
Sbjct: 3 ctgggcaacatagcgagacctca 25
>30722_ptr-mir-1303:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ctgggcaacatagcgagacctca 106
|||||||||||||||||||||||
Sbjct: 2 ctgggcaacatagcgagacctca 24
>31361_ppy-mir-1303:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ctgggcaacatagcgagacctca 106
|||||||||||||||||||||||
Sbjct: 3 ctgggcaacatagcgagacctca 25
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 71 actgcactccagcctgggcaacatagcgagac 102
||||||||||||||||||| ||| ||| ||||
Sbjct: 61 actgcactccagcctgggcgacaaagcaagac 92
>30688_ptr-mir-1273:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 71 actgcactccagcctgggcaacatagcgagac 102
||||||||||||||||||| ||| ||| ||||
Sbjct: 61 actgcactccagcctgggcgacaaagcaagac 92
