miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29050_hsa-mir-1181:mirbase
Length = 81
Score = 115 bits (58), Expect = 1e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 gccgtcgccgccacccgagccggagcgngctgggc-gccaaggcaagatggtggactaca 59
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 13 gccgtcgccgccacccgagccggagcgggctgggccgccaaggcaagatggtggactaca 72
Query: 60 gcgtgtggg 68
|||||||||
Sbjct: 73 gcgtgtggg 81
>30632_ptr-mir-1181:mirbase
Length = 80
Score = 111 bits (56), Expect = 2e-25
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 2 ccgtcgccgccacccgagccggagcgngctgggc-gccaaggcaagatggtggactacag 60
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 14 ccgtcgccgccacccgagccggagcgggctgggccgccaaggcaagatggtggactacag 73
Query: 61 cgtgtgg 67
|||||||
Sbjct: 74 cgtgtgg 80
>31281_ppy-mir-1181:mirbase
Length = 81
Score = 109 bits (55), Expect = 7e-25
Identities = 64/66 (96%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 4 gtcgccgccacccgagccggagcgngctgggc-gccaaggcaagatggtggactacagcg 62
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 16 gtcgccgccacccgagccggagcgggctgggccgccaaggcaagatggtggactacagcg 75
Query: 63 tgtggg 68
||||||
Sbjct: 76 tgtggg 81
