miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 5e-15
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
|||||||||||||||||||||| | | ||| ||||||||| ||||||||| || |||||
Sbjct: 6 aggttggtgcaaaagtaatcgcggtttttgtcattactttcaatggcaaacaccacaatt 65
Query: 70 acttttgcac 79
||||||||||
Sbjct: 66 acttttgcac 75
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| || | | ||||||||||||| | | |||||| |||||||
Sbjct: 15 aggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaatt 74
Query: 70 acttttgcac 79
||||||||||
Sbjct: 75 acttttgcac 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 51 aatggcaaaaccctcaattacttttgcac 79
|||||||||| || |||||||||||||||
Sbjct: 49 aatggcaaaaaccgcaattacttttgcac 21
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| || | | ||||||||||||| | | |||||| |||||||
Sbjct: 15 aggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaatt 74
Query: 70 acttttgcac 79
||||||||||
Sbjct: 75 acttttgcac 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 51 aatggcaaaaccctcaattacttttgcac 79
|||||||||| || |||||||||||||||
Sbjct: 49 aatggcaaaaaccgcaattacttttgcac 21
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| |||| | |||| |||||||| |||| ||||| || | |||
Sbjct: 94 aggttggtgcaaaagtaattgcagtttttgctattactttcaatgacaaaaaccgcgatt 35
Query: 70 acttttgcac 79
||||||||||
Sbjct: 34 acttttgcac 25
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgc 31
||||||||||||||||||||||
Sbjct: 19 aggttggtgcaaaagtaatcgc 40
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| || | | ||||||||||||| | | |||||| |||||||
Sbjct: 83 aggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaatt 24
Query: 70 acttttgcac 79
||||||||||
Sbjct: 23 acttttgcac 14
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 51 aatggcaaaaccctcaattacttttgcac 79
|||||||||| || |||||||||||||||
Sbjct: 49 aatggcaaaaaccgcaattacttttgcac 77
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| || | | ||||||||||||| | | |||||| |||||||
Sbjct: 15 aggttggtgcaaaagtaattgcggtttttgccattactttcagtagcaaaaatctcaatt 74
Query: 70 acttttgcac 79
||||||||||
Sbjct: 75 acttttgcac 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 51 aatggcaaaaccctcaattacttttgcac 79
|||||||||| || |||||||||||||||
Sbjct: 49 aatggcaaaaaccgcaattacttttgcac 21
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 63.9 bits (32), Expect = 2e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 4 tttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccc 63
||||| ||||||||||||||| || | | | ||||||||||||| |||||||||| ||
Sbjct: 2 tttattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaacc 61
Query: 64 tcaattacttttgcac 79
|||||||||||||||
Sbjct: 62 acaattacttttgcac 77
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 63.9 bits (32), Expect = 2e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 4 tttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccc 63
||||| ||||||||||||||| || | | | ||||||||||||| |||||||||| ||
Sbjct: 96 tttattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaacc 37
Query: 64 tcaattacttttgcac 79
|||||||||||||||
Sbjct: 36 acaattacttttgcac 21
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 63.9 bits (32), Expect = 2e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 4 tttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccc 63
||||| ||||||||||||||| || | | | ||||||||||||| |||||||||| ||
Sbjct: 96 tttattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaacc 37
Query: 64 tcaattacttttgcac 79
|||||||||||||||
Sbjct: 36 acaattacttttgcac 21
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 77 ttgccattacttttaatggcaaaatccgcaattacttttgcac 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 29 aggttggtgcaaaagtaattgcggattttgccatta 64
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 77 ttgccattacttttaatggcaaaatccgcaattacttttgcac 35
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 77 ttgccattacttttaatggcaaaatccgcaattacttttgcac 35
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 76 ttgccattacttttaatggcaaaatccgcaattacttttgcac 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 28 aggttggtgcaaaagtaattgcggattttgccatta 63
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 77 ttgccattacttttaatggcaaaatccgcaattacttttgcac 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 29 aggttggtgcaaaagtaattgcggattttgccatta 64
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 76 ttgccattacttttaatggcaaaatccgcaattacttttgcac 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 28 aggttggtgcaaaagtaattgcggattttgccatta 63
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 76 ttgccattacttttaatggcaaaatccgcaattacttttgcac 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 28 aggttggtgcaaaagtaattgcggattttgccatta 63
>28001_mml-mir-548e:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| || | || |||||||||| |||||||||||| || ||
Sbjct: 15 aggttggtgcaaaagtaattgcgagttttaccattactttcaatggcaaaaccggcagtt 74
Query: 70 acttttgcac 79
||||||||||
Sbjct: 75 acttttgcac 84
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| |||| | |||| |||||||| ||||| |||| | |||||
Sbjct: 9 aggttggtgcaaaagtaattgcagtttttgctattacttttaatggtaaaaactgcaatt 68
Query: 70 actttt 75
||||||
Sbjct: 69 actttt 74
>28002_mml-mir-548f:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 39 gccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||| |||||||||| || |||||||||||||||
Sbjct: 51 gccattactttcaatggcaaaatccgcaattacttttgcac 11
>30485_ptr-mir-548l:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 11 ggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatta 70
|||||||||| |||||| |||| | ||||||||||||| ||| |||||||| ||| ||
Sbjct: 79 ggttggtgcacaagtaactgcagtttttgccattactttctatgacaaaacccgcaaata 20
Query: 71 cttttgcac 79
|||||||||
Sbjct: 19 cttttgcac 11
>28805_hsa-mir-548ae-2:mirbase
Length = 67
Score = 56.0 bits (28), Expect = 5e-09
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 21 aaagtaatcgcagctcttgccattacttt-aaatggcaaaaccctcaattacttttgcac 79
|||||||| |||| | ||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct: 61 aaagtaattgcagtttttgccattacttttaaatgacaaaaaccacaattacttttgcac 2
>28855_hsa-mir-548x-2:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 21 aaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattacttttg 76
|||||||| |||| | || |||||||||| |||||||||| || ||||||||||||
Sbjct: 77 aaagtaattgcagtttttaccattacttttaatggcaaaagccacaattacttttg 22
>28019_mml-mir-570:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaa 60
||||||||||||| ||||| |||| | ||||||||||||| || |||||||
Sbjct: 5 aggttggtgcaaacgtaattgcagtttttgccattacttttaaaggcaaaa 55
>28797_hsa-mir-548a-3:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 5 ttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccct 64
|||| |||| |||||||||||||| || | || |||||||||| |||||||||||
Sbjct: 10 ttattaggtcggtgcaaaagtaattgcgagttttaccattactttcaatggcaaaactgg 69
Query: 65 caattacttttgcac 79
|||||||||||||||
Sbjct: 70 caattacttttgcac 84
>28798_hsa-mir-548a-3:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 5 ttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccct 64
|||| |||| |||||||||||||| || | || |||||||||| |||||||||||
Sbjct: 10 ttattaggtcggtgcaaaagtaattgcgagttttaccattactttcaatggcaaaactgg 69
Query: 65 caattacttttgcac 79
|||||||||||||||
Sbjct: 70 caattacttttgcac 84
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
|||| ||||||||||||||||| | | ||| ||||||||| ||||| |||| | ||||
Sbjct: 11 aggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactggaatt 70
Query: 70 acttttgcact 80
|||||||||||
Sbjct: 71 acttttgcact 81
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 41 cattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||| |||||||||| || |||||||||||||||
Sbjct: 41 cattacttttaatggcaaaaaccgcaattacttttgcac 3
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 13 ttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattact 72
|||||||||||||||| || | ||| | ||||||| |||||||||| || ||||||||
Sbjct: 86 ttggtgcaaaagtaattgccagttttgtcgttacttttaatggcaaaaaccacaattact 27
Query: 73 tttgcac 79
|||||||
Sbjct: 26 tttgcac 20
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
|||| ||||||||||||||||| | | ||| ||||||||| ||||| |||| | ||||
Sbjct: 11 aggtgggtgcaaaagtaatcgcggtttttgtcattacttttaatggtaaaaactggaatt 70
Query: 70 acttttgcact 80
|||||||||||
Sbjct: 71 acttttgcact 81
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
|||||||||| || |||||||||| || |||||||||||||||
Sbjct: 77 ttgccattacgtttaatggcaaaatccgcaattacttttgcac 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 29 aggttggtgcaaaagtaattgcggattttgccatta 64
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||| ||||||| |||||||||| || |||||||||||||||
Sbjct: 77 ttgccgttacttttaatggcaaaatccgcaattacttttgcac 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| || | | |||||||||
Sbjct: 29 aggttggtgcaaaagtaattgcggattttgccatta 64
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 7e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaa 51
|||||||||||||||||||||| | | ||| |||||||||||
Sbjct: 7 aggttggtgcaaaagtaatcgcggtttttgtcattactttaa 48
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
|||||||||||||||||||| | | | ||||||||||| | | |||||||| || |||
Sbjct: 13 aggttggtgcaaaagtaatcactgtttttgccattactctcagtggcaaaaaccgtgatt 72
Query: 70 acttttgcac 79
||||||||||
Sbjct: 73 acttttgcac 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 10 aggttggtgcaaaagtaatc 29
||||||||||||||||||||
Sbjct: 88 aggttggtgcaaaagtaatc 69
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 19 caaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattacttttgca 78
|||||||||| ||| | ||| ||||||||| |||||||||| || | ||||||||||||
Sbjct: 82 caaaagtaattacagtttttgtcattacttttaatggcaaaaaccactattacttttgca 23
Query: 79 c 79
|
Sbjct: 22 c 22
>28842_hsa-mir-548l:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 ggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatta 70
|||||||||| |||||| |||| | ||||||||||||| | | |||||||| ||| ||
Sbjct: 79 ggttggtgcacaagtaactgcagtttttgccattactttctacgacaaaacccgcaaata 20
Query: 71 cttttgcac 79
|||||||||
Sbjct: 19 cttttgcac 11
>28853_hsa-mir-548w:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 aatggcaaaaccctcaattacttttgcac 79
||||||||||||| |||||||||||||||
Sbjct: 41 aatggcaaaacccacaattacttttgcac 69
>28796_hsa-mir-548a-2:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 13 ttggtgcaaaagtaatcgcagctcttgccattactttaaatggc-aaaaccctcaattac 71
|||||||||||||||| || | ||||||||||||| || ||| |||| || |||||||
Sbjct: 87 ttggtgcaaaagtaattgccagttttgccattacttttaacggcaaaaaaccccaattac 28
Query: 72 ttttgcac 79
||||||||
Sbjct: 27 ttttgcac 20
>28810_hsa-mir-548aj-1:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 20 aaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattactttt 75
||||||||| |||| | || |||||||||| ||||||| |||| |||||||||||
Sbjct: 64 aaaagtaattgcagtttttaccattacttttaatggcataacctgcaattactttt 9
>28825_hsa-mir-548f-1:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattacttt 49
|||||||||||||||||||| ||| | ||| |||||||||
Sbjct: 4 aggttggtgcaaaagtaatcacagtttttgacattacttt 43
>27997_mml-mir-548b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||||||| | ||| ||| ||| ||| |||||||||| ||||||||
Sbjct: 15 aggttggtgcaaaagtaattggggcttgggcctttattttcaatggcaaaaacctcaatt 74
Query: 70 acttttg 76
||||||
Sbjct: 75 gcttttg 81
>28795_hsa-mir-548a-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 13 ttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattact 72
|||||||||||||||| || | ||| | ||||||| |||||||||| | ||||||||
Sbjct: 87 ttggtgcaaaagtaattgccagttttgtcgttacttttaatggcaaaaatcacaattact 28
Query: 73 tttgcac 79
|||||||
Sbjct: 27 tttgcac 21
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 35 ttgccattacttttacaggcaaaaaccacaattacttttgcac 77
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 13 ttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaattact 72
||||| ||||||||| |||| | ||||||||| ||| | ||||||| || ||||||||
Sbjct: 72 ttggtacaaaagtaactgcagtttttgccattattttcgacggcaaaaaccgcaattact 13
Query: 73 tttgcac 79
|||||||
Sbjct: 12 tttgcac 6
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 63 ttgccattacttttacaggcaaaaaccacaattacttttgcac 21
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 37 ttgccattactttaaatggcaaaaccctcaattacttttgcac 79
||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 63 ttgccattacttttacaggcaaaaaccacaattacttttgcac 21
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||| ||| ||| | ||||||||||||| ||||||||| | ||||
Sbjct: 3 aggttggtgcaaaagaaat--cagtttttgccattactttctatggcaaaaactgtaatt 60
Query: 70 acttttgcac 79
||||||||||
Sbjct: 61 acttttgcac 70
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 38 tgccattactttaaatggcaaaaccctcaattacttttgcac 79
|||||||| ||| |||||||||| | |||||||||||||||
Sbjct: 47 tgccattatttttaatggcaaaaacagcaattacttttgcac 6
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccctcaatt 69
||||||||||||||| ||| || | | ||||||||||||| | ||||||| || ||||
Sbjct: 80 aggttggtgcaaaaggaattgcggtttttgccattacttttataggcaaaaaccacaatg 21
Query: 70 acttttgcac 79
|||||||||
Sbjct: 20 ccttttgcac 11
>28844_hsa-mir-548n:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 aaatggcaaaaccctcaattacttttgcac 79
|||| ||||||||| |||||||||||||||
Sbjct: 38 aaatagcaaaacccgcaattacttttgcac 67
>30486_ptr-mir-548n:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 aaatggcaaaaccctcaattacttttgcac 79
|||| ||||||||| |||||||||||||||
Sbjct: 39 aaatagcaaaacccccaattacttttgcac 68
>28824_hsa-mir-548e:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 tatcaggttggtgcaaaagta 26
|||||||||||||||||||||
Sbjct: 85 tatcaggttggtgcaaaagta 65
>27996_mml-mir-548a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 41 cattactttaaatggcaaaac-cctcaattacttttgcac 79
||||||||| |||||||||| || |||||||||||||||
Sbjct: 60 cattacttttaatggcaaaaaaccacaattacttttgcac 21
>27999_mml-mir-548d:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 4 tttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccc 63
||||| || |||||||||||| ||| | | | ||||||||||||| | ||||| | ||
Sbjct: 96 tttattagtttggtgcaaaagaaattgtggtttttgccattacttttataggcaagaacc 37
Query: 64 tcaattacttttgcac 79
|||||||||||||||
Sbjct: 36 acaattacttttgcac 21
>28000_mml-mir-548d:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 4 tttatcaggttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaaccc 63
||||| || |||||||||||| ||| | | | ||||||||||||| | ||||| | ||
Sbjct: 96 tttattagtttggtgcaaaagaaattgtggtttttgccattacttttataggcaagaacc 37
Query: 64 tcaattacttttgcac 79
|||||||||||||||
Sbjct: 36 acaattacttttgcac 21
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 aggttggtgcaaaagtaatcgcagctcttgccatta 45
||||||||||||||||||| ||| | |||||||||
Sbjct: 87 aggttggtgcaaaagtaattacagtttttgccatta 52
>28839_hsa-mir-548i-4:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 52 atggcaaaaccctcaattacttttgcac 79
||||||||| || |||||||||||||||
Sbjct: 34 atggcaaaatccgcaattacttttgcac 7
>28848_hsa-mir-548q:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 14 tggtgcaaaagtaatcgcagctcttgccattacttt 49
||||||||||||||| || | | |||||||||||||
Sbjct: 10 tggtgcaaaagtaatggcggtttttgccattacttt 45
>30471_ptr-mir-548a-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 13 ttggtgcaaaagtaatcgcagctcttgccattactttaaatggcaaaa 60
|||||||||||||||| || | ||| ||||||||| ||||||||||
Sbjct: 86 ttggtgcaaaagtaattgccagttttgtcattacttttaatggcaaaa 39
