miRNEST 2.0, an integrative microRNA resource :: BLAST
>31917_mmu-mir-196b:mirbase
Length = 85
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 67 gacactgccttcat 80
||||||||||||||
Sbjct: 61 gacactgccttcat 74
>32784_rno-mir-196b:mirbase
Length = 85
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 67 gacactgccttcat 80
||||||||||||||
Sbjct: 61 gacactgccttcat 74
>33270_bta-mir-196b:mirbase
Length = 85
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 67 gacactgccttcat 80
||||||||||||||
Sbjct: 61 gacactgccttcat 74
>27792_mml-mir-196b:mirbase
Length = 75
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 8 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 68 acactgccttcat 80
|||||||||||||
Sbjct: 61 acactgccttcat 73
>28509_hsa-mir-196b:mirbase
Length = 84
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 8 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 68 acactgccttcat 80
|||||||||||||
Sbjct: 61 acactgccttcat 73
>30273_ptr-mir-196b:mirbase
Length = 83
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 8 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 68 acactgccttcat 80
|||||||||||||
Sbjct: 61 acactgccttcat 73
>30889_ppy-mir-196b:mirbase
Length = 84
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 8 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 68 acactgccttcat 80
|||||||||||||
Sbjct: 61 acactgccttcat 73
>34027_ssc-mir-196b:mirbase
Length = 80
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 9 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 60
Query: 69 cactgccttcat 80
||||||||||||
Sbjct: 61 cactgccttcat 72
>34028_ssc-mir-196b:mirbase
Length = 80
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 9 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 60
Query: 69 cactgccttcat 80
||||||||||||
Sbjct: 61 cactgccttcat 72
>27081_eca-mir-196b:mirbase
Length = 84
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 8 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 67
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccagctttctctcgacagcacg 60
Query: 68 acactgccttcat 80
|||||||||||||
Sbjct: 61 acactgccttcat 73
>31526_oan-mir-196b:mirbase
Length = 85
Score = 117 bits (59), Expect = 1e-27
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgttggga-tccacctttctctcgacagca 65
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 66 cgacactgccttcat 80
|||||||||||||||
Sbjct: 61 cgacactgccttcat 75
>26754_cfa-mir-196b:mirbase
Length = 58
Score = 115 bits (58), Expect = 5e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 22 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttca 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttca 58
>27416_mdo-mir-196b:mirbase
Length = 86
Score = 109 bits (55), Expect = 3e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgtt-gggatccacctttctctcgacagca 65
|||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 66 cgacactgccttcat 80
||| |||||||||||
Sbjct: 61 cgatactgccttcat 75
>25986_gga-mir-196-2:mirbase
Length = 94
Score = 71.9 bits (36), Expect = 6e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 7 aactggtcggtgatttaggtagtttcctgttgttggga-tccacctttctctcgacagca 65
||||| || ||| ||||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct: 1 aactgctctgtggtttaggtagtttcatgttgttggggctccacctttctctctacagca 60
Query: 66 cgacactgcctt 77
||| ||||||||
Sbjct: 61 cgaaactgcctt 72
>25817_xtr-mir-196b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttggg-atccacctttctctcgacagcacgacactgcctt 77
|||||||||||| |||||||||| || |||||||||||| ||| || || ||||||||
Sbjct: 14 tttaggtagttttatgttgttgggcattcacctttctctctacaacaagaaactgcctt 72
>25985_gga-mir-196-1:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 5 agaactggtcggtgatttaggtagtttcctgttgttggg 43
||||||| || |||| |||||||||||| ||||||||||
Sbjct: 7 agaactgctctgtgaattaggtagtttcatgttgttggg 45
>25816_xtr-mir-196a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggat 45
||||||||||||| ||||||||||||
Sbjct: 23 tttaggtagtttcatgttgttgggat 48
>25987_gga-mir-196-3:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggat 45
||||||||||||| ||||||||||||
Sbjct: 22 tttaggtagtttcatgttgttgggat 47
>34347_dre-mir-196a-1:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggat 45
||||||||||||| ||||||||||||
Sbjct: 19 tttaggtagtttcatgttgttgggat 44
>34348_dre-mir-196a-2:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggat 45
||||||||||||| ||||||||||||
Sbjct: 9 tttaggtagtttcatgttgttgggat 34
>27515_age-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27580_lla-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27791_mml-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28324_ggo-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28508_hsa-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30112_ppa-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30272_ptr-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30888_ppy-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>31525_oan-mir-196a:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 28 ttaggtagtttcatgttgttgggat 52
>31916_mmu-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>32783_rno-mir-196a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>33269_bta-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>34026_ssc-mir-196a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttgggat 45
|||||||||||| ||||||||||||
Sbjct: 21 ttaggtagtttcatgttgttgggat 45
>34623_fru-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggatcca 48
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>34770_tni-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttgggatcca 48
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>26752_cfa-mir-196a-1:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 9 gtgaattaggtagtttcatgttgttggg 36
>26753_cfa-mir-196a-2:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 taggtagtttcctgttgttgggat 45
||||||||||| ||||||||||||
Sbjct: 1 taggtagtttcatgttgttgggat 24
>27080_eca-mir-196a:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgagttaggtagtttcatgttgttggg 28
>27790_mml-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28323_ggo-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28507_hsa-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>30887_ppy-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>33268_bta-mir-196a-1:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||| |||||||||||| ||||||||||
Sbjct: 18 gtgaattaggtagtttcatgttgttggg 45
>34349_dre-mir-196b:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
||||||||||||||||| |||||||||
Sbjct: 5 gtgatttaggtagtttcaagttgttggg 32
>34351_dre-mir-196d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgatttaggtagtttcctgttgttggg 43
|||||||||||||||| ||||||||||
Sbjct: 2 gtgatttaggtagttttatgttgttggg 29
>34622_fru-mir-196a-1:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttggg 43
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
>34769_tni-mir-196a-1:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 tttaggtagtttcctgttgttggg 43
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
>30271_ptr-mir-196a-1:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ttaggtagtttcctgttgttggg 43
|||||||||||| ||||||||||
Sbjct: 5 ttaggtagtttcatgttgttggg 27
