miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29174_hsa-mir-1307:mirbase
Length = 149
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgctgccaatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgttgccaatcga 80
Query: 61 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 119
>30724_ptr-mir-1307:mirbase
Length = 148
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgctgccaatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgttgccaatcga 80
Query: 61 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 119
>31365_ppy-mir-1307:mirbase
Length = 149
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgctgccaatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgttgccaatcga 80
Query: 61 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctcggcgtggcgtcggtcgtggtagataggcggtcatgc 119
>33488_bta-mir-1307:mirbase
Length = 149
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 1 actgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgctgccaatcga 60
|||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 21 actgccactgcctaccaatctcgaccggacctcgaccggctcgtctatattgccaatcga 80
Query: 61 ctcggcgtggcgtcggtcgtggtagataggcggtcat 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctcggcgtggcgtcggtcgtggtagataggcggtcat 117
>34147_ssc-mir-1307:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 12 ctaccaatctcgaccggacctcgaccggctcgtctgtgctgccaatcgactcggcgtggc 71
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1 ctaccaatctcgaccggacctcgaccggctcgtctatgttgccaatcgactcggcgtggc 60
Query: 72 gtcggtcgtggtagataggc 91
||||||||||||||||||||
Sbjct: 61 gtcggtcgtggtagataggc 80
>26915_cfa-mir-1307:mirbase
Length = 60
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 22 cgaccggacctcgaccggctcgtctgtgctgccaatcgactcggcgtggcgtcggtcgtg 81
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1 cgaccggacctcgaccggctcgtctatgttgccaatcgactcggcgtggcgtcggtcgtg 60
