miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29258_hsa-mir-3128:mirbase
          Length = 66

 Score =  131 bits (66), Expect = 8e-32
 Identities = 66/66 (100%)
 Strand = Plus / Minus

                                                                      
Query: 8  ttcctattgcaagtaaaaaactctcattttttaaggaaaatgagagttttttacttgcca 67
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttcctattgcaagtaaaaaactctcattttttaaggaaaatgagagttttttacttgcca 7

                
Query: 68 gaggaa 73
          ||||||
Sbjct: 6  gaggaa 1



 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 48/52 (92%), Gaps = 4/52 (7%)
 Strand = Plus / Plus

                                                              
Query: 16 gcaagtaaaaaactctcatttt--ttaaggaaaatgagagttttttacttgc 65
          ||||||||||||||||||||||  ||||  ||||||||||||||||||||||
Sbjct: 9  gcaagtaaaaaactctcattttccttaa--aaaatgagagttttttacttgc 58