miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29037_hsa-mir-938:mirbase
Length = 83
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 8 gaaggtgtaccatgtacccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60
Query: 68 ctttaagaacttggtatgccttc 90
|||||||||||||||||||||||
Sbjct: 61 ctttaagaacttggtatgccttc 83
>31273_ppy-mir-938:mirbase
Length = 83
Score = 149 bits (75), Expect = 4e-37
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 8 gaaggtgtaccatgtacccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 60
Query: 68 ctttaagaacttggtatgccttc 90
|||||||||||||||| ||||||
Sbjct: 61 ctttaagaacttggtacgccttc 83
>30624_ptr-mir-938:mirbase
Length = 81
Score = 137 bits (69), Expect = 2e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 8 gaaggtgtaccatgtacccttaaaggtgaacccagtgcaccttcatgaaccgtggtacac 67
||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 gaaggtgtaccatgtgcccttaaaggtgaacccagtgtaccttcatgaaccatggtacac 60
Query: 68 ctttaagaacttggtatgcct 88
|||||||||||||||||||||
Sbjct: 61 ctttaagaacttggtatgcct 81
>28148_mml-mir-938:mirbase
Length = 75
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 12 gtgtaccatgtacccttaaaggtgaacccagtgcaccttcatgaaccgtggtacaccttt 71
||||||||||| | ||||||| |||| || |||||||||||||||| |||||||||||||
Sbjct: 5 gtgtaccatgtgcacttaaagatgaagccggtgcaccttcatgaactgtggtacaccttt 64
Query: 72 aagaacttggt 82
|||||||||||
Sbjct: 65 aagaacttggt 75
