miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31346_ppy-mir-1290:mirbase
Length = 78
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 91 ttggagcattctggattttggatttttggattagagatgct 131
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 35 ttggagcatttcggattttggatttttggatcagagatgct 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 tccaaaatctgaaactttttga 59
||||||||||||||||||||||
Sbjct: 39 tccaaaatctgaaactttttga 18
>29148_hsa-mir-1290:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 tccaaaatctgaaactttttga 59
||||||||||||||||||||||
Sbjct: 39 tccaaaatctgaaactttttga 18
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 103 ggattttggatttttggattagagatgct 131
||||||||||||||||||| || ||||||
Sbjct: 47 ggattttggatttttggatcagggatgct 75
>30703_ptr-mir-1290:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 tccaaaatctgaaactttttga 59
||||||||||||||||||||||
Sbjct: 39 tccaaaatctgaaactttttga 18
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 103 ggattttggatttttggattagagatgct 131
||||||||||||||||||| || ||||||
Sbjct: 47 ggattttggatttttggatcagggatgct 75
