miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31220_ppy-mir-650:mirbase
Length = 95
Score = 91.7 bits (46), Expect = 4e-20
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 1 caggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctcct 54
||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15 caggaggcagctctctcgggacgtctccaccatggcctggtctctgctcctcct 68
>28078_mml-mir-650a-1:mirbase
Length = 95
Score = 83.8 bits (42), Expect = 1e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1 caggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctcct 54
||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 15 caggaggcagcgctctcaggacgtctccaccatggtctgggctctgctcctcct 68
>28968_hsa-mir-650:mirbase
Length = 96
Score = 83.8 bits (42), Expect = 1e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1 caggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctcct 54
||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 15 caggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 68
>28080_mml-mir-650b:mirbase
Length = 95
Score = 79.8 bits (40), Expect = 2e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 caggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctc 52
||||||||||| |||||||||| |||||||||||||||||| ||||||||||
Sbjct: 15 caggaggcagcgctctcgggacatctccaccatggcctgggatctgctcctc 66
>28082_mml-mir-650d:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 6e-16
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 16 tcgggacgtctccaccatggcctgggctctgctcctcct 54
|||||||||||||||||||||||||||||||||||||||
Sbjct: 30 tcgggacgtctccaccatggcctgggctctgctcctcct 68
>28079_mml-mir-650a-2:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 2e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1 caggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctcct 54
||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 15 caggaggcagcgctctcaggacttctccaccatggtctgggctctgctcctcct 68
>30571_ptr-mir-650:mirbase
Length = 95
Score = 73.8 bits (37), Expect = 1e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 2 aggaggcagcactctcgggacgtctccaccatggcctgggctctgctcctcct 54
|||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 15 aggaggcagcgctctcaggacgtcaccaccatggccagggctctgctcctcct 67
>28081_mml-mir-650c:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 9e-12
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 23 gtctccaccatggcctgggctctgctcctcct 54
||||||||||||||||||||||||||||||||
Sbjct: 33 gtctccaccatggcctgggctctgctcctcct 64
