miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29233_hsa-mir-3116-1:mirbase
          Length = 74

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 12 tgcctggaacatagtaggcactcagtaaa 40
          |||||||||||||||||| ||||| ||||
Sbjct: 30 tgcctggaacatagtagggactcaataaa 2



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 12 tgcctggaacatagtaggcactcagtaaa 40
          |||||||||||||||||| ||||| ||||
Sbjct: 45 tgcctggaacatagtagggactcaataaa 73




>29234_hsa-mir-3116-2:mirbase
          Length = 68

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 12 tgcctggaacatagtaggcactca 35
          |||||||||||||||||| |||||
Sbjct: 27 tgcctggaacatagtagggactca 4



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tgcctggaacatagtaggcactca 35
          |||||||||||||||||| |||||
Sbjct: 42 tgcctggaacatagtagggactca 65