miRNEST 2.0, an integrative microRNA resource :: BLAST
>27507_age-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>27570_lla-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>27615_sla-mir-125b:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>27719_mml-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>28208_mne-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>28301_ggo-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>28432_hsa-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>30210_ptr-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>30819_ppy-mir-125b-1:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgct 90
|||||||| |||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgct 88
>32722_rno-mir-125b-1:mirbase
Length = 87
Score = 129 bits (65), Expect = 4e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 13 tcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcg 72
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 11 tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttg 70
Query: 73 ggagctgcgagtcgtgc 89
|||||||||||||||||
Sbjct: 71 ggagctgcgagtcgtgc 87
>32723_rno-mir-125b-1:mirbase
Length = 87
Score = 129 bits (65), Expect = 4e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 13 tcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcg 72
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 11 tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttg 70
Query: 73 ggagctgcgagtcgtgc 89
|||||||||||||||||
Sbjct: 71 ggagctgcgagtcgtgc 87
>27011_eca-mir-125b:mirbase
Length = 88
Score = 125 bits (63), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 2 gcgctcctc-tcaatccctgagaccctaacttgtgatgtttaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgtgc 89
|||||||| ||||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgtgc 87
>30088_ppa-mir-125b:mirbase
Length = 88
Score = 121 bits (61), Expect = 1e-28
Identities = 80/85 (94%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 3 gcgctcctcgtcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggt 62
||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct: 2 gcgctcctc-tcagtccctgagaccctaacttgtgatgttaaccgtttaaatccacgggt 60
Query: 63 taggctctcgggagctgcgagtcgt 87
|||||||| ||||||||||||||||
Sbjct: 61 taggctcttgggagctgcgagtcgt 85
>33971_ssc-mir-125b-1:mirbase
Length = 80
Score = 119 bits (60), Expect = 4e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 13 tcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcg 72
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 5 tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttg 64
Query: 73 ggagctgcgagtcgtg 88
||||||||||| ||||
Sbjct: 65 ggagctgcgagccgtg 80
>33202_bta-mir-125b-1:mirbase
Length = 88
Score = 115 bits (58), Expect = 6e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 74
Query: 77 ctgcgagtcg 86
||||||||||
Sbjct: 75 ctgcgagtcg 84
>31843_mmu-mir-125b-1:mirbase
Length = 77
Score = 109 bits (55), Expect = 4e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 13 tcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcg 72
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 11 tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttg 70
Query: 73 ggagctg 79
|||||||
Sbjct: 71 ggagctg 77
>31844_mmu-mir-125b-1:mirbase
Length = 77
Score = 109 bits (55), Expect = 4e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 13 tcagtccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcg 72
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 11 tcagtccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttg 70
Query: 73 ggagctg 79
|||||||
Sbjct: 71 ggagctg 77
>26690_cfa-mir-125b-1:mirbase
Length = 61
Score = 97.6 bits (49), Expect = 1e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 60
Query: 77 c 77
|
Sbjct: 61 c 61
>27376_mdo-mir-125b-2:mirbase
Length = 63
Score = 97.6 bits (49), Expect = 1e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 3 tccctgagaccctaacttgtgatgtttaccgtttaaatccacgggttaggctcttgggag 62
Query: 77 c 77
|
Sbjct: 63 c 63
>31480_oan-mir-125:mirbase
Length = 104
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| |||| |||||||||||||||||||||| ||| |||||
Sbjct: 29 tccctgagaccctaacttgtgatgtttcccgtttaaatccacgggttaggttcttgggag 88
Query: 77 ctgcgagtcgtgc 89
||| |||| ||||
Sbjct: 89 ctgtgagttgtgc 101
>26454_tgu-mir-125-2:mirbase
Length = 72
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| ||||| | ||||||||||||||||||||||| |||||
Sbjct: 11 tccctgagaccctaacttgtgatgtttagcttttaaatccacgggttaggctcttgggag 70
Query: 77 ct 78
||
Sbjct: 71 ct 72
>25765_xtr-mir-125b-1:mirbase
Length = 88
Score = 67.9 bits (34), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaa-tccacgggttaggctctcggga 75
||||||||||||||||| |||| ||||| | || ||| ||||||||||||||||| ||||
Sbjct: 15 tccctgagaccctaacttgtgatgtttagctttaaaaatccacgggttaggctcttggga 74
Query: 76 gctgcgagtcgtgc 89
|||| |||| ||||
Sbjct: 75 gctgtgagttgtgc 88
>25943_gga-mir-125b:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggttt 43
||||||||||||||||||| |||||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggttt 43
>26453_tgu-mir-125-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggttt 43
||||||||||||||||||| |||||||||
Sbjct: 9 agtccctgagaccctaacttgtgaggttt 37
>27012_eca-mir-125b-2:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 4 agtccctgagaccctaacttgtgaggt 30
>27508_age-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>27571_lla-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>27720_mml-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>28209_mne-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>28302_ggo-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>28433_hsa-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>30211_ptr-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>30820_ppy-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>31407_lca-mir-125b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>31846_mmu-mir-125b-2:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 5 agtccctgagaccctaacttgtgaggt 31
>31845_mmu-mir-125b-2:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 5 agtccctgagaccctaacttgtgaggt 31
>32724_rno-mir-125b-2:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>33087_rno-mir-3588:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 83 agtccctgagaccctaacttgtgaggt 57
>33203_bta-mir-125b-2:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 11 agtccctgagaccctaacttgtgaggt 37
>33972_ssc-mir-125b-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgaggt 41
||||||||||||||||||| |||||||
Sbjct: 15 agtccctgagaccctaacttgtgaggt 41
>34279_dre-mir-125b-1:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 5e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggtttaccgtttaaatccacgggttaggctctcgggag 76
||||||||||||||||| |||| |||| || ||| | ||||||||||| ||| |||||
Sbjct: 46 tccctgagaccctaacttgtgacgttttcctgttatgtgcacgggttaggttcttgggag 105
Query: 77 ctg 79
|||
Sbjct: 106 ctg 108
>25766_xtr-mir-125b-2:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgagg 40
||||||||||||||||||| ||||||
Sbjct: 11 agtccctgagaccctaacttgtgagg 36
>27375_mdo-mir-125b-1:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 agtccctgagaccctaactagtgagg 40
||||||||||||||||||| ||||||
Sbjct: 10 agtccctgagaccctaacttgtgagg 35
>26691_cfa-mir-125b-2:mirbase
Length = 61
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggt 41
||||||||||||||||| |||||||
Sbjct: 1 tccctgagaccctaacttgtgaggt 25
>34282_dre-mir-125c:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tccctgagaccctaactagtgaggt 41
||||||||||||||||| |||||||
Sbjct: 14 tccctgagaccctaactcgtgaggt 38
>34281_dre-mir-125b-3:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 gtccctgagaccctaactagtgag 39
|||||||||||||||||| |||||
Sbjct: 30 gtccctgagaccctaacttgtgag 53
