miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28108_mml-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28109_mml-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28988_hsa-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>28989_hsa-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>30588_ptr-mir-671:mirbase
Length = 117
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 7 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 65
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 66 ctccggttctcagggctccacctctttcgggccgtagagcc 106
>31233_ppy-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>31234_ppy-mir-671:mirbase
Length = 118
Score = 168 bits (85), Expect = 5e-43
Identities = 98/101 (97%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 1 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 aactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-c 66
Query: 61 ctccggttctcagggctccccctctttcgggccgtaaagcc 101
||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 67 ctccggttctcagggctccacctctttcgggccgtagagcc 107
>32284_mmu-mir-671:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 94/98 (95%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttccctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctc 59
Query: 64 cggttctcagggctccccctctttcgggccgtaaagcc 101
|||||||||||||||| ||||||||| |||||| ||||
Sbjct: 60 cggttctcagggctccacctctttcgagccgtagagcc 97
>32285_mmu-mir-671:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 94/98 (95%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttccctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctc 59
Query: 64 cggttctcagggctccccctctttcgggccgtaaagcc 101
|||||||||||||||| ||||||||| |||||| ||||
Sbjct: 60 cggttctcagggctccacctctttcgagccgtagagcc 97
>33447_bta-mir-671:mirbase
Length = 118
Score = 145 bits (73), Expect = 7e-36
Identities = 89/93 (95%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 3 ctggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttccct 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 10 ctggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cct 68
Query: 63 ccggttctcagggctccccctctttcgggccgt 95
||||||||||||||||| ||| || ||||||||
Sbjct: 69 ccggttctcagggctccaccttttccgggccgt 101
>27253_eca-mir-671:mirbase
Length = 84
Score = 137 bits (69), Expect = 2e-33
Identities = 82/85 (96%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttccctccggtt 68
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctccggtt 59
Query: 69 ctcagggctccccctctttcgggcc 93
||||||||||| |||||| ||||||
Sbjct: 60 ctcagggctccacctcttccgggcc 84
>27254_eca-mir-671:mirbase
Length = 84
Score = 137 bits (69), Expect = 2e-33
Identities = 82/85 (96%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttccctccggtt 68
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctccggtt 59
Query: 69 ctcagggctccccctctttcgggcc 93
||||||||||| |||||| ||||||
Sbjct: 60 ctcagggctccacctcttccgggcc 84
>32974_rno-mir-671:mirbase
Length = 81
Score = 131 bits (66), Expect = 1e-31
Identities = 76/78 (97%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 caggaagaggaggaagccctggaggggctggaggtgatggatgttttccctccggttctc 71
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctccggttctc 59
Query: 72 agggctccccctctttcg 89
|||||||| |||||||||
Sbjct: 60 agggctccacctctttcg 77
>26899_cfa-mir-671:mirbase
Length = 74
Score = 125 bits (63), Expect = 7e-30
Identities = 73/75 (97%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 12 caggaagaggaggaagccctggaggggctggaggtgatggatgttttccctccggttctc 71
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgtttt-cctccggttctc 59
Query: 72 agggctccccctctt 86
|||||||| ||||||
Sbjct: 60 agggctccacctctt 74
