miRNEST 2.0, an integrative microRNA resource :: BLAST
>31332_ppy-mir-1273:mirbase
Length = 103
Score = 107 bits (54), Expect = 3e-24
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 8 gagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagct 67
|||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||| ||
Sbjct: 94 gagtcttgctctgtcacccaggctggagtgcagtggcgtgatcttggctcactgcaacct 35
Query: 68 ccgcctcccgggttcacgccattctcccgcctca 101
|| ||||||||||||| || ||||||| ||||||
Sbjct: 34 ccacctcccgggttcaagcaattctcctgcctca 1
Score = 75.8 bits (38), Expect = 1e-14
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 145 agccaagatcacgcctttgcactccaggctgggtgacagagcaagactct 194
||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 46 agccaagatcacgccactgcactccagcctgggtgacagagcaagactct 95
Score = 54.0 bits (27), Expect = 4e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 102 ggaggcggaggctgcagtgagccaagatcatgccattgcactc 144
||||| ||||| |||||||||||||||||| |||| |||||||
Sbjct: 27 ggaggtggaggttgcagtgagccaagatcacgccactgcactc 69
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 99.6 bits (50), Expect = 8e-22
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 8 gagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagct 67
|||||| ||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||
Sbjct: 94 gagtcttgctttgtcgcccaggctggagtgcagtggcgcaatcttggctcactgcaacct 35
Query: 68 ccgcctcccgggttcacgccattctcccgcctca 101
|| || |||||||||| || ||||||| ||||||
Sbjct: 34 ccaccacccgggttcaagcaattctcctgcctca 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 145 agccaagatcacgcctttgcactccaggctgggtgacagagcaagactct 194
||||||||| |||| |||||||||| ||||| |||| |||||||||||
Sbjct: 46 agccaagattgcgccactgcactccagcctgggcgacaaagcaagactct 95
>29127_hsa-mir-1273e:mirbase
Length = 102
Score = 85.7 bits (43), Expect = 1e-17
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 7 ggagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagc 66
||||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 95 ggagtctcgctgtgtcacccaggctggagtacagtggctcgatctcggctcactgcagcc 36
Query: 67 tccgcctcccgggttcacgccattctcccgcctca 101
||| | ||| ||||||| || ||||||| ||||||
Sbjct: 35 tccacttcctgggttcaagcaattctcctgcctca 1
>30688_ptr-mir-1273:mirbase
Length = 102
Score = 83.8 bits (42), Expect = 5e-17
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 8 gagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagct 67
|||||| ||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||
Sbjct: 94 gagtcttgctttgtcgcccaggctggagtgcagtggcgcaatcttggctcactgcaacct 35
Query: 68 ccgcctcccgggttcacgccattctcccgcctca 101
|| || ||| |||||| || ||| ||| ||||||
Sbjct: 34 ccaccacccaggttcaagcaattttcctgcctca 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 145 agccaagatcacgcctttgcactccaggctgggtgacagagcaagactct 194
||||||||| |||| |||||||||| ||||| |||| |||||||||||
Sbjct: 46 agccaagattgcgccactgcactccagcctgggcgacaaagcaagactct 95
>34143_ssc-mir-1285:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 2 gagacggagtctcgctctgttgcccaggctggagtgcagtggc 44
||||||| |||||||| |||||||||||||||||| |||||||
Sbjct: 75 gagacggggtctcgctatgttgcccaggctggagtacagtggc 33
>29126_hsa-mir-1273d:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 24 cccaggctggagtgcagtggcgcgatctcggctcactgca 63
||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 68 cccaggctgaagtgcagtggcacgatcttggctcactgca 29
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 109 gaggctgcagtgagccaagatcatgccattgcact 143
|||||||||||||||||||||| ||||| ||||||
Sbjct: 24 gaggctgcagtgagccaagatcgtgccactgcact 58
>29659_hsa-mir-4459:mirbase
Length = 66
Score = 48.1 bits (24), Expect = 3e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 24 cccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc 75
||||||||||||| ||||| | |||||| |||||||||||| |||| |||||
Sbjct: 65 cccaggctggagt-cagtgccacgatcttggctcactgcaacctccacctcc 15
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 101 aggaggcggaggctgcagtgagccaagatc 130
|||||| ||||| |||||||||||||||||
Sbjct: 14 aggaggtggaggttgcagtgagccaagatc 43
>28878_hsa-mir-566:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 54 gctcactgcaagctccgcctcccgggttcacgccattct 92
||||||||||| || ||||||||||||||| || |||||
Sbjct: 94 gctcactgcaaccttcgcctcccgggttcaagcgattct 56
>30505_ptr-mir-566:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 54 gctcactgcaagctccgcctcccgggttcacgccattct 92
||||||||||| || ||||||||||||||| || |||||
Sbjct: 93 gctcactgcaaccttcgcctcccgggttcaagcgattct 55
>31147_ppy-mir-566:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 54 gctcactgcaagctccgcctcccgggttcacgccattct 92
||||||||||| || ||||||||||||||| || |||||
Sbjct: 90 gctcactgcaaccttcgcctcccgggttcaagcaattct 52
>29125_hsa-mir-1273c:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 tgagacggagtctcgctctgttgcccaggctgga 34
|||||| |||||||| ||||||||||| ||||||
Sbjct: 44 tgagacagagtctcgttctgttgcccaagctgga 77
>29129_hsa-mir-1273g:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 162 tgcactccaggctgggtgacagagcaagac 191
|||||||||| ||| |||||||||||||||
Sbjct: 62 tgcactccagcctgagtgacagagcaagac 91
>31314_ppy-mir-1254:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 tgttgcccaggctggagtgcagtggc 44
||||||| ||||||||||||||||||
Sbjct: 80 tgttgcctaggctggagtgcagtggc 55
>29128_hsa-mir-1273f:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 6e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 23 gcccaggctggag-tgcagtggcgcgatctcggctcactgcaagctcc 69
||||||||||| | |||||| ||| |||||| ||||||||||| ||||
Sbjct: 78 gcccaggctgggggtgcagttgcgtgatctcagctcactgcaacctcc 31
>29626_hsa-mir-4430:mirbase
Length = 49
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 25 ccaggctggagtgcagtggcgcgatctcggctcact 60
||||| ||||||||||||| ||||||| |||||||
Sbjct: 46 ccaggttggagtgcagtggtacgatctccgctcact 11
