miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                
Query: 7  gagtctcgctctgttacccaggctggagtgcagtggcacgacctcagctcactg 60
          |||||||||| ||| |||||||||||||| ||||||| ||| ||| ||||||||
Sbjct: 94 gagtctcgctgtgtcacccaggctggagtacagtggctcgatctcggctcactg 41




>31332_ppy-mir-1273:mirbase
          Length = 103

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                
Query: 6  agagtctcgctctgttacccaggctggagtgcagtggc 43
          ||||||| ||||||| ||||||||||||||||||||||
Sbjct: 95 agagtcttgctctgtcacccaggctggagtgcagtggc 58



 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 66 ctgcactgcagcctgggtgacagagcaagactct 99
          ||||||| ||||||||||||||||||||||||||
Sbjct: 62 ctgcactccagcctgggtgacagagcaagactct 95




>29673_hsa-mir-4472-2:mirbase
          Length = 67

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 76  gcctgggtgacagagcaagactctgtctcaaaaa 109
           ||||||| ||| ||||||||||||||||||||||
Sbjct: 61  gcctgggcgacggagcaagactctgtctcaaaaa 28




>29129_hsa-mir-1273g:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 66  ctgcactgcagcctgggtgacagagcaagactctgtctca 105
           ||||||| ||||||| |||||||||||||||  |||||||
Sbjct: 61  ctgcactccagcctgagtgacagagcaagaccttgtctca 100



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 9  gtctcgctctgttacccaggctggagtgcagtgg 42
          |||| ||||||| || ||||||||||||||||||
Sbjct: 91 gtcttgctctgtcactcaggctggagtgcagtgg 58




>29126_hsa-mir-1273d:mirbase
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                 
Query: 22 acccaggctggagtgcagtggcacgacctcagctcactg 60
          |||||||||| ||||||||||||||| ||  ||||||||
Sbjct: 69 acccaggctgaagtgcagtggcacgatcttggctcactg 31




>34143_ssc-mir-1285:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                             
Query: 9  gtctcgctctgttacccaggctggagtgcagtggc 43
          |||||||| |||| ||||||||||||| |||||||
Sbjct: 67 gtctcgctatgttgcccaggctggagtacagtggc 33




>29124_hsa-mir-1273:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                
Query: 6  agagtctcgctctgttacccaggctggagtgcagtggc 43
          ||||||| ||| |||  |||||||||||||||||||||
Sbjct: 95 agagtcttgctttgtcgcccaggctggagtgcagtggc 58



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 66 ctgcactgcagcctgggtgacagagcaagactct 99
          ||||||| ||||||||| |||| |||||||||||
Sbjct: 62 ctgcactccagcctgggcgacaaagcaagactct 95




>30688_ptr-mir-1273:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                
Query: 6  agagtctcgctctgttacccaggctggagtgcagtggc 43
          ||||||| ||| |||  |||||||||||||||||||||
Sbjct: 95 agagtcttgctttgtcgcccaggctggagtgcagtggc 58



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 66 ctgcactgcagcctgggtgacagagcaagactct 99
          ||||||| ||||||||| |||| |||||||||||
Sbjct: 62 ctgcactccagcctgggcgacaaagcaagactct 95




>29125_hsa-mir-1273c:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 2  agacagagtctcgctctgttacccaggctgga 33
          ||||||||||||| |||||| |||| ||||||
Sbjct: 46 agacagagtctcgttctgttgcccaagctgga 77




>29626_hsa-mir-4430:mirbase
          Length = 49

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                              
Query: 24 ccaggctggagtgcagtggcacgacctcagctcact 59
          ||||| ||||||||||||| |||| ||| |||||||
Sbjct: 46 ccaggttggagtgcagtggtacgatctccgctcact 11




>31314_ppy-mir-1254:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 aggctggagtgcagtggcac 45
          ||||||||||||||||||||
Sbjct: 72 aggctggagtgcagtggcac 53