miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31332_ppy-mir-1273:mirbase
          Length = 103

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                        
Query: 36 cccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
          |||||||||||||||||||| ||||||| |||||||  ||||||||
Sbjct: 78 cccaggctggagtgcagtggcgtgatcttggctcactgcaacctcc 33



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  gcctgggtgacagagcaagactct 105
           ||||||||||||||||||||||||
Sbjct: 72  gcctgggtgacagagcaagactct 95




>29124_hsa-mir-1273:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                              
Query: 30 ttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
          |||| ||||||||||||||||||||| |  |||| |||||||  ||||||||
Sbjct: 84 ttgtcgcccaggctggagtgcagtggcgcaatcttggctcactgcaacctcc 33




>29126_hsa-mir-1273d:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtgg 55
          ||||||||||||||  ||||||||| ||||||||||
Sbjct: 84 agtttcgctcttgtcacccaggctgaagtgcagtgg 49




>30688_ptr-mir-1273:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                              
Query: 30 ttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
          |||| ||||||||||||||||||||| |  |||| |||||||  ||||||||
Sbjct: 84 ttgtcgcccaggctggagtgcagtggcgcaatcttggctcactgcaacctcc 33




>31314_ppy-mir-1254:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 30 ttgttgcccaggctggagtgcagtgg 55
          |||||||| |||||||||||||||||
Sbjct: 81 ttgttgcctaggctggagtgcagtgg 56




>34143_ssc-mir-1285:mirbase
          Length = 80

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 31 tgttgcccaggctggagtgcagtgg 55
          |||||||||||||||||| ||||||
Sbjct: 58 tgttgcccaggctggagtacagtgg 34




>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                              
Query: 36 cccaggctggagtgcagtggagtgatctcggctcac 71
          ||||||||||||| ||||||   |||||||||||||
Sbjct: 78 cccaggctggagtacagtggctcgatctcggctcac 43




>29673_hsa-mir-4472-2:mirbase
          Length = 67

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 82  gcctgggtgacagagcaagactctgtct 109
           ||||||| ||| ||||||||||||||||
Sbjct: 61  gcctgggcgacggagcaagactctgtct 34