miRNEST 2.0, an integrative microRNA resource :: BLAST
>28852_hsa-mir-548v:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 15 aatactgggtttgagcaaaagtaattgcggttttgccatcatgccaaaagctacagttac 74
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatactaggtttgagcaaaagtaattgcggttttgccatcatgccaaaagctacagttac 60
Query: 75 ttttgcaccagcctaatatt 94
||||||||||||||||||||
Sbjct: 61 ttttgcaccagcctaatatt 80
>28848_hsa-mir-548q:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 71 ttacttttgcaccagcctaatat 93
|||||||||||||||||||||||
Sbjct: 23 ttacttttgcaccagcctaatat 1
>28808_hsa-mir-548ah:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 59 caaaagctacagttacttttgcaccagcc 87
||||| || ||||||||||||||||||||
Sbjct: 47 caaaaactgcagttacttttgcaccagcc 75
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 ttacttttgcaccagcctaatattt 95
|||||||||||||| ||||||||||
Sbjct: 70 ttacttttgcaccaacctaatattt 94
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 8e-05
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 22 ggtttgagcaaaagtaattgcgg-ttttgccat 53
|||||| |||||||||||||||| |||||||||
Sbjct: 30 ggtttgtgcaaaagtaattgcggattttgccat 62
>28812_hsa-mir-548ak:mirbase
Length = 57
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 55 gcaaaagtaattgcggtttt 36
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 8 gcaaaagtaattgcggtttt 27
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 23 gcaaaagtaattgcggtttt 42
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 23 gcaaaagtaattgcggtttt 42
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 92 gcaaaagtaattgcggtttt 73
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 5 gcaaaagtaattgcggtttt 24
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 75 gcaaaagtaattgcggtttt 56
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 gcaaaagtaattgcggtttt 48
||||||||||||||||||||
Sbjct: 23 gcaaaagtaattgcggtttt 42
