miRNEST 2.0, an integrative microRNA resource :: BLAST
>27999_mml-mir-548d:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgattacttctgcac 91
||||| |||||||||||||| |||||||| || |||||||||| ||||||| |||||
Sbjct: 80 aaaagaaattgtggtttttgccattacttttataggcaagaaccacaattacttttgcac 21
Query: 92 caacccaata 101
||||| ||||
Sbjct: 20 caacctaata 11
>28000_mml-mir-548d:mirbase
Length = 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgattacttctgcac 91
||||| |||||||||||||| |||||||| || |||||||||| ||||||| |||||
Sbjct: 80 aaaagaaattgtggtttttgccattacttttataggcaagaaccacaattacttttgcac 21
Query: 92 caacccaata 101
||||| ||||
Sbjct: 20 caacctaata 11
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccgt 77
|||| ||||||| ||||| || ||||||||||| |||||||| |||||||| ||||
Sbjct: 4 tattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccac 63
Query: 78 gattacttctgcaccaacc 96
||||||| ||||||||||
Sbjct: 64 aattacttttgcaccaacc 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 23 ggttggtataaaagtaattgtggtttttggcatt 56
||||||| |||||||||||||||||||| ||||
Sbjct: 82 ggttggtgcaaaagtaattgtggtttttgccatt 49
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccgt 77
|||| ||||||| ||||| || ||||||||||| |||||||| |||||||| ||||
Sbjct: 94 tattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccac 35
Query: 78 gattacttctgcaccaacc 96
||||||| ||||||||||
Sbjct: 34 aattacttttgcaccaacc 16
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 ggttggtataaaagtaattgtggtttttggcatt 56
||||||| |||||||||||||||||||| ||||
Sbjct: 16 ggttggtgcaaaagtaattgtggtttttgccatt 49
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccgt 77
|||| ||||||| ||||| || ||||||||||| |||||||| |||||||| ||||
Sbjct: 94 tattaggttggtgcaaaagaaactgtggtttttgccattactttcaatggcaaaaaccac 35
Query: 78 gattacttctgcaccaacc 96
||||||| ||||||||||
Sbjct: 34 aattacttttgcaccaacc 16
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 ggttggtataaaagtaattgtggtttttggcatt 56
||||||| |||||||||||||||||||| ||||
Sbjct: 16 ggttggtgcaaaagtaattgtggtttttgccatt 49
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 23 ggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgatta 82
||||||| ||||||||||| ||||||| ||||||| |||| ||| ||||| |||||
Sbjct: 93 ggttggtgcaaaagtaattgcagtttttgctattactttcaatgacaaaaaccgcgatta 34
Query: 83 cttctgcaccaacccaata 101
||| |||||||||| ||||
Sbjct: 33 cttttgcaccaacctaata 15
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccgt 77
|||| ||||||| ||||||||||||||| |||| |||| ||||| ||| |||||
Sbjct: 85 tattaggttggtgcaaaagtaattgtggtgtttgccattgaaagtaatgacaaaaaccgc 26
Query: 78 gattacttctgcaccaacccaata 101
|||||||| |||||||||| ||||
Sbjct: 25 gattacttttgcaccaacctaata 2
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 65 tggcaagaaccgtgattacttctgcaccaacc 96
|||||| |||||||||||||| ||||||||||
Sbjct: 56 tggcaaaaaccgtgattacttttgcaccaacc 87
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattactt 60
|||| ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccattactt 53
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattactt 60
|||| ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccattactt 53
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 15 aagtatttggttggtataaaagtaattgtggtttttggcatta 57
||||||| ||||||| ||||||||||| |||||||| |||||
Sbjct: 107 aagtattaggttggtgcaaaagtaattgcggtttttgtcatta 65
>28850_hsa-mir-548t:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 23 ggttggtataaaagtaattgtggtttttggcatta 57
||||||| |||||||||||||||||||| |||||
Sbjct: 73 ggttggtgcaaaagtaattgtggtttttgtcatta 39
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattactt 60
|||| ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 87 tattaggttggtgcaaaagtaattgcggtttttgccattactt 45
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcattactt 60
|||| ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgcggtttttgccattactt 53
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgattacttctgcac 91
||||| || ||||||||||| |||||||| || ||||| |||| ||||||| |||||
Sbjct: 18 aaaagaaactgtggtttttgccattacttttacaggcaaaaaccacaattacttttgcac 77
Query: 92 caacccaata 101
||||| ||||
Sbjct: 78 caacctaata 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 18 tatttggttggtataaaagtaattgtggtttttg 51
|||| ||||||| ||||||||||||||||||||
Sbjct: 87 tattaggttggtgcaaaagtaattgtggtttttg 54
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgattacttctgcac 91
||||| || ||||||||||| |||||||| || ||||| |||| ||||||| |||||
Sbjct: 80 aaaagaaactgtggtttttgccattacttttacaggcaaaaaccacaattacttttgcac 21
Query: 92 caacccaata 101
||||| ||||
Sbjct: 20 caacctaata 11
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttg 51
|||| ||||||| ||||||||||||||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgtggtttttg 44
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaaccgtgattacttctgcac 91
||||| || ||||||||||| |||||||| || ||||| |||| ||||||| |||||
Sbjct: 80 aaaagaaactgtggtttttgccattacttttacaggcaaaaaccacaattacttttgcac 21
Query: 92 caacccaata 101
||||| ||||
Sbjct: 20 caacctaata 11
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttg 51
|||| ||||||| ||||||||||||||||||||
Sbjct: 11 tattaggttggtgcaaaagtaattgtggtttttg 44
>28847_hsa-mir-548p:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 23 ggttggtataaaagtaattgtggtttttggcattactt 60
||||||||||||| |||||| ||||||| ||||||||
Sbjct: 5 ggttggtataaaattaattgcagtttttgtcattactt 42
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 32 aaaagtaattgtggtttttggcatta 57
|||||||||||||||||||| |||||
Sbjct: 24 aaaagtaattgtggtttttgccatta 49
>30487_ptr-mir-548p:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 23 ggttggtataaaagtaattgtggtttttggcattactt 60
||||||||||||| |||||| ||||||| ||||||||
Sbjct: 5 ggttggtataaaattaattgcagtttttgtcattactt 42
>28803_hsa-mir-548ad:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 ggttggtataaaagtaattgtggtttttg 51
||||||| ||||||||||||||||||||
Sbjct: 7 ggttggtgcaaaagtaattgtggtttttg 35
>28805_hsa-mir-548ae-2:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 aaaagtaattgtggtttttggcatt 56
|||||||||||||||||||| ||||
Sbjct: 6 aaaagtaattgtggtttttgtcatt 30
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 69/85 (81%)
Strand = Plus / Plus
Query: 17 gtatttggttggtataaaagtaattgtggtttttggcattacttctaatggcaagaaccg 76
||||| ||||||| ||||||||||| ||||||| ||||||| |||||| || ||| |
Sbjct: 4 gtattaggttggtgcaaaagtaattgcagtttttgctattacttttaatggtaaaaactg 63
Query: 77 tgattacttctgcaccaacccaata 101
||||||| | |||||||| ||||
Sbjct: 64 caattacttttacaccaacctaata 88
>28816_hsa-mir-548b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaacc 75
|||||||||||||||||| | | ||| || |||||||||||||
Sbjct: 25 aaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
>28817_hsa-mir-548b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 32 aaaagtaattgtggtttttggcattacttctaatggcaagaacc 75
|||||||||||||||||| | | ||| || |||||||||||||
Sbjct: 25 aaaagtaattgtggttttggcctttattttcaatggcaagaacc 68
>28855_hsa-mir-548x-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 18 tatttggttggtataaaagtaattgtggtttttggcatta 57
|||| |||||| | |||||||||||||| ||||| |||||
Sbjct: 9 tattaggttggcacaaaagtaattgtggcttttgccatta 48
