miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>30035_hsa-mir-5096:mirbase
          Length = 70

 Score = 75.8 bits (38), Expect = 2e-14
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 339 gatggatcacctgaggtcgggagtttgagaccatcctgaccaacat 384
           |||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 66  gatggatcacctgaggtcaggagtttgagaccagcctgaccaacat 21




>29141_hsa-mir-1285-1:mirbase
          Length = 84

 Score = 69.9 bits (35), Expect = 2e-12
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                            
Query: 13 tgtagagataggatntcactgtgttgcccgggctggtctcaaacttctgg 62
          |||||||||||||| ||||| |||||||| ||||||||||||||| ||||
Sbjct: 1  tgtagagataggatctcactttgttgcccaggctggtctcaaactcctgg 50




>30698_ptr-mir-1285:mirbase
          Length = 83

 Score = 69.9 bits (35), Expect = 2e-12
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                            
Query: 13 tgtagagataggatntcactgtgttgcccgggctggtctcaaacttctgg 62
          |||||||||||||| ||||| |||||||| ||||||||||||||| ||||
Sbjct: 1  tgtagagataggatctcactttgttgcccaggctggtctcaaactcctgg 50




>31341_ppy-mir-1285a:mirbase
          Length = 84

 Score = 54.0 bits (27), Expect = 9e-08
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                            
Query: 13 tgtagagataggatntcactgtgttgcccgggctggtctcaaacttctgg 62
          |||||||||||| | ||||| | |||||| ||||||||||||||| ||||
Sbjct: 1  tgtagagatagggtctcactttattgcccaggctggtctcaaactcctgg 50




>30034_hsa-mir-5095:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 285 ggccgggcgcggttgctcacgcctgtaatccca 317
           ||||||||||||| | |||||||||||||||||
Sbjct: 34  ggccgggcgcggtggttcacgcctgtaatccca 2



 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 287 ccgggcgcggttgctcacgcctgtaatccca 317
           ||||| ||||| |||||||||||||||||||
Sbjct: 56  ccgggagcggtggctcacgcctgtaatccca 86




>31198_ppy-mir-619:mirbase
          Length = 99

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 292 cgcggttgctcacgcctgtaatcccaacactttgggaggct 332
           |||||| ||||| ||||||||||||| || |||||||||||
Sbjct: 51  cgcggtggctcatgcctgtaatcccagcattttgggaggct 11




>28058_mml-mir-619:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 6e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 293 gcggttgctcacgcctgtaatcccaacactttgggaggct 332
           ||||| ||||| ||||||||||||| || |||||||||||
Sbjct: 50  gcggtggctcatgcctgtaatcccagcattttgggaggct 11




>30549_ptr-mir-619:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 294 cggttgctcacgcctgtaatcccaacactttgggaggct 332
           |||| ||||| ||||||||||||| || |||||||||||
Sbjct: 49  cggtggctcatgcctgtaatcccagcattttgggaggct 11




>28935_hsa-mir-619:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 9e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 299 gctcacgcctgtaatcccaacactttgggaggct 332
           ||||| ||||||||||||| || |||||||||||
Sbjct: 44  gctcatgcctgtaatcccagcattttgggaggct 11




>29505_hsa-mir-3929:mirbase
          Length = 55

 Score = 44.1 bits (22), Expect = 9e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 88  ctcccaaagtgctgggattataggtctgagccac 121
           ||||||||||||||||||||  ||| ||||||||
Sbjct: 35  ctcccaaagtgctgggattactggtgtgagccac 2



 Score = 44.1 bits (22), Expect = 9e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 299 gctcacgcctgtaatcccaacactttgggaggct 332
           |||||| || ||||||||| ||||||||||||||
Sbjct: 5   gctcacaccagtaatcccagcactttgggaggct 38